Homer de novo Motif Results (hs_ColonAdenocarcinoma_LoVo_undef_MAZ_SRX335286_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 408
Total background sequences = 45366
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C A C G T C T A G A C G T G A C T C T A G A G T C A G T C G T C A G C A T C T A G C T A G G T A C C T G A T G C A G A T C 1e-134-3.088e+0225.49%0.58%20.4bp (32.8bp)RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer(0.982)
More Information | Similar Motifs Found
motif file (matrix)
2 C T A G C G A T G A T C C A T G A G T C A G T C A C G T C T G A A C T G A G T C C T G A C G T A A G T C 1e-33-7.669e+012.94%0.00%18.8bp (0.0bp)Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer(0.941)
More Information | Similar Motifs Found
motif file (matrix)
3 T A G C G A C T G A C T A C T G A T C G G A C T C G A T C G T A G A T C A G T C 1e-27-6.387e+0122.30%5.84%24.0bp (33.2bp)PB0159.1_Rfx4_2/Jaspar(0.721)
More Information | Similar Motifs Found
motif file (matrix)
4 C G A T A G T C G C A T A G T C A G T C G T C A C A G T T A C G A C T G C G T A T A C G T G C A G C A T 1e-15-3.629e+014.17%0.22%27.1bp (24.5bp)EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer(0.612)
More Information | Similar Motifs Found
motif file (matrix)
5 A C G T C T A G G T C A A G T C A G C T A C T G A T C G A C T G A G C T C G A T C T A G A G T C A G C T A G T C A G T C A G C T 1e-12-2.906e+011.72%0.01%17.1bp (17.0bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.545)
More Information | Similar Motifs Found
motif file (matrix)
6 C T A G C G T A A G T C C G A T G T A C G C T A A C G T A C T G A G T C A G C T C G T A A C T G A G T C C G T A C T G A G C T A 1e-12-2.906e+011.72%0.01%17.6bp (22.1bp)Pax6/MA0069.1/Jaspar(0.615)
More Information | Similar Motifs Found
motif file (matrix)
7 T A G C A C T G C T A G C G T A C G T A A C G T A T G C C T A G C G T A A G T C G T C A A G C T G T A C 1e-12-2.837e+011.23%0.00%27.3bp (10.6bp)FOXH1/MA0479.1/Jaspar(0.640)
More Information | Similar Motifs Found
motif file (matrix)
8 A T G C A C G T A C G T A T G C A G T C A C G T G T A C C G T A T A C G A G T C C G A T C T G A A G T C G T A C C G T A A C G T 1e-12-2.837e+011.23%0.00%16.5bp (16.5bp)SPIB/MA0081.1/Jaspar(0.621)
More Information | Similar Motifs Found
motif file (matrix)
9 A G C T T G C A C T G A T G A C A T G C G C A T A C T G C T G A T C A G C A T G 1e-12-2.811e+019.07%2.18%25.9bp (28.8bp)AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer(0.733)
More Information | Similar Motifs Found
motif file (matrix)
10 * A T G C C G T A C A T G A C G T C G T A A G T C G T C A C G T A C G T A C T A G C T A G A G C T G C T A 1e-10-2.348e+014.41%0.58%26.7bp (29.0bp)Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.611)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G T A C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G A T G T A C C G T A A C G T A C G T A G C T C G T A A C T G 1e-9-2.290e+011.23%0.01%15.9bp (21.5bp)MEF2C/MA0497.1/Jaspar(0.637)
More Information | Similar Motifs Found
motif file (matrix)
12 * G T A C C G A T C T A G C G T A A G T C A C G T G A T C G T C A A G C T A C G T 1e-9-2.254e+016.62%1.47%26.6bp (28.4bp)JDP2/MA0655.1/Jaspar(0.757)
More Information | Similar Motifs Found
motif file (matrix)
13 * C G T A C G A T G T C A A G T C A C G T A G C T A G T C G T A C A T C G A T G C 1e-9-2.250e+011.96%0.06%16.4bp (29.9bp)ETV6/MA0645.1/Jaspar(0.873)
More Information | Similar Motifs Found
motif file (matrix)
14 * T A G C C G T A C A G T C G A T A G T C A G T C A C G T C G A T C G T A C T A G 1e-8-2.030e+013.19%0.33%29.0bp (28.9bp)TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer(0.752)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C T G C T G A C T A G C T G A C G A T C T A G C T G A G T A C C G A T A C T G A C T G A G T C C G T A 1e-8-1.959e+011.47%0.03%26.4bp (26.9bp)SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar(0.635)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C G T A C G T C G A T G T C A A T G C C G A T A T C G C G A T C G T A G C T A C G T A C T G A A T C G A C G T A C G T C G A T 1e-7-1.803e+011.23%0.02%15.0bp (25.4bp)EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer(0.579)
More Information | Similar Motifs Found
motif file (matrix)
17 * C T G A A C G T C G T A C G T A C G T A C G T A A C T G A G T C G T A C C G A T C T G A C G A T A G C T C G T A A C G T C G T A 1e-7-1.766e+010.98%0.01%24.3bp (14.3bp)HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer(0.583)
More Information | Similar Motifs Found
motif file (matrix)
18 * C A G T T C G A C G T A A C G T A C T G C T G A G C T A G A C T G C T A C G T A G A T C G T A C C G T A 1e-7-1.734e+012.94%0.34%24.0bp (31.9bp)HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer(0.743)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C G T C G T A A C T G A C G T C G A T A G T C A G T C G A T C A C G T A C G T 1e-7-1.644e+012.70%0.30%26.0bp (30.1bp)PB0033.1_Irf3_1/Jaspar(0.629)
More Information | Similar Motifs Found
motif file (matrix)
20 * C G T A A G T C A C G T C G T A A C T G C G A T A C G T C G A T G T C A A G T C T C G A C T G A A C G T G T A C C G T A A G C T 1e-6-1.594e+010.74%0.00%30.4bp (0.0bp)PH0040.1_Hmbox1/Jaspar(0.718)
More Information | Similar Motifs Found
motif file (matrix)
21 * C G T A C G T A A T C G A G T C A C G T A C G T A C G T G C T A A G T C A G C T 1e-6-1.472e+014.17%0.92%18.1bp (30.6bp)Nr2e3/MA0164.1/Jaspar(0.850)
More Information | Similar Motifs Found
motif file (matrix)
22 * A G T C G C T A A T G C G C T A A G T C T C G A G T A C T G C A A G T C C G T A G T A C G T C A G A T C 1e-5-1.182e+012.45%0.40%21.1bp (24.5bp)Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer(0.701)
More Information | Similar Motifs Found
motif file (matrix)
23 * A G T C C G T A T A G C C G T A G T A C A C T G C G T A G T A C T A G C A T G C 1e-5-1.182e+011.72%0.17%26.6bp (30.6bp)PB0044.1_Mtf1_1/Jaspar(0.660)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C T G A C G T A C G T A C G T C T A G A G T C C G T A C G A T A G C T A G T C C G T A A G T C C G T A 1e-4-1.012e+010.49%0.00%28.8bp (6.9bp)PB0170.1_Sox17_2/Jaspar(0.617)
More Information | Similar Motifs Found
motif file (matrix)
25 * A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T 1e-2-4.715e+000.25%0.00%15.0bp (0.0bp)THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer(0.673)
More Information | Similar Motifs Found
motif file (matrix)