Information for 12-AAGCTTTAYT (Motif 21)

C G T A C G T A A T C G A G T C A C G T A C G T A C G T G C T A A G T C A G C T
Reverse Opposite:
T C G A C T A G C G A T G T C A G T C A C G T A C T A G T A G C A C G T A C G T
p-value:1e-6
log p-value:-1.472e+01
Information Content per bp:1.780
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif418.1
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets42.9 +/- 18.1bp
Average Position of motif in Background48.5 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-AAGCTTTAYT
CAAGCTT----
 A C G T C G T A C G T A A T C G A G T C A C G T A C G T A C G T G C T A A G T C A G C T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAGCTTTAYT---
-DGWTTTATGRCN
 C G T A C G T A A T C G A G T C A C G T A C G T A C G T G C T A A G T C A G C T A C G T A C G T A C G T
A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGCTTTAYT-
TGACCTTTNCNT
 A C G T C G T A C G T A A T C G A G T C A C G T A C G T A C G T G C T A A G T C A G C T A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGCTTTAYT
AAACMATTAN-
 A C G T C G T A C G T A A T C G A G T C A C G T A C G T A C G T G C T A A G T C A G C T
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAGCTTTAYT
-NGCTN----
 C G T A C G T A A T C G A G T C A C G T A C G T A C G T G C T A A G T C A G C T
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

PB0046.1_Mybl1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AAGCTTTAYT--
TTGAAAACCGTTAATTT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T C G A G T C A C G T A C G T A C G T G C T A A G T C A G C T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAGCTTTAYT------
NAATTTTATTACCNNN
 C G T A C G T A A T C G A G T C A C G T A C G T A C G T G C T A A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AAGCTTTAYT-----
NTNAATTTTATTGNATT
 A C G T A C G T C G T A C G T A A T C G A G T C A C G T A C G T A C G T G C T A A G T C A G C T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAGCTTTAYT--
--TTTTTATTGG
 C G T A C G T A A T C G A G T C A C G T A C G T A C G T G C T A A G T C A G C T A C G T A C G T
A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AAGCTTTAYT
NGAAGC------
 A C G T A C G T C G T A C G T A A T C G A G T C A C G T A C G T A C G T G C T A A G T C A G C T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T