p-value: | 1e-33 |
log p-value: | -7.669e+01 |
Information Content per bp: | 1.817 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 2.94% |
Number of Background Sequences with motif | 1.2 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 41.0 +/- 18.8bp |
Average Position of motif in Background | 25.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.7 |
Multiplicity (# of sites on avg that occur together) | 1.08 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 1 |
Score: | 0.94 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTCGCCTAGCAAC- TGTTKCCTAGCAACM |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 2 |
Score: | 0.85 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GTCGCCTAGCAAC-- ---SCCTAGCAACAG |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 3 |
Score: | 0.84 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTCGCCTAGCAAC--- -CCGCATAGCAACGGA |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 4 |
Score: | 0.81 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTCGCCTAGCAAC------- TGTGACCCTTAGCAACCGATTAA |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 5 |
Score: | 0.81 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTCGCCTAGCAAC--- -TACCATAGCAACGGT |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTCGCCTAGCAAC GTTGCCATGGCAAC |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 7 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTCGCCTAGCAAC--- -TACCCTAGTTACCGA |
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PB0158.1_Rfx3_2/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTCGCCTAGCAAC------- ACTGACCCTTGGTTACCACAAAG |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTCGCCTAGCAAC- TTGCCATGGCAACC |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTCGCCTAGCAAC- TTGCCATGGCAACN |
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