Information for 7-CAKTWYMAWGGYW (Motif 10)

A T G C C G T A C A T G A C G T C G T A A G T C G T C A C G T A C G T A C T A G C T A G A G C T G C T A
Reverse Opposite:
C G A T T C G A A G T C A G T C C G A T C G A T A C G T T C A G G C A T G T C A G T A C A C G T A T C G
p-value:1e-10
log p-value:-2.348e+01
Information Content per bp:1.638
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif4.41%
Number of Background Sequences with motif262.2
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets56.5 +/- 26.7bp
Average Position of motif in Background52.6 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAKTWYMAWGGYW
-ACATCAAAGG--
 A T G C C G T A C A T G A C G T C G T A A G T C G T C A C G T A C G T A C T A G C T A G A G C T G C T A
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAKTWYMAWGGYW
-ACWTCAAAGG--
 A T G C C G T A C A T G A C G T C G T A A G T C G T C A C G T A C G T A C T A G C T A G A G C T G C T A
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAKTWYMAWGGYW
CTCATTTGCATW---
 A C G T A C G T A T G C C G T A C A T G A C G T C G T A A G T C G T C A C G T A C G T A C T A G C T A G A G C T G C T A
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAKTWYMAWGGYW
TATAATTATAATATTC
 A C G T A C G T A C G T A T G C C G T A C A T G A C G T C G T A A G T C G T C A C G T A C G T A C T A G C T A G A G C T G C T A
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAKTWYMAWGGYW
BTVATTWGCATA---
 A C G T A C G T A T G C C G T A C A T G A C G T C G T A A G T C G T C A C G T A C G T A C T A G C T A G A G C T G C T A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAKTWYMAWGGYW
-ATTTGCATA---
 A T G C C G T A C A T G A C G T C G T A A G T C G T C A C G T A C G T A C T A G C T A G A G C T G C T A
A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CAKTWYMAWGGYW
NCGTATTATAATCNTA
 A C G T A C G T A C G T A T G C C G T A C A T G A C G T C G T A A G T C G T C A C G T A C G T A C T A G C T A G A G C T G C T A
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAKTWYMAWGGYW
-ACATCAAAGGNA
 A T G C C G T A C A T G A C G T C G T A A G T C G T C A C G T A C G T A C T A G C T A G A G C T G C T A
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAKTWYMAWGGYW
-ATTTGCATA---
 A T G C C G T A C A T G A C G T C G T A A G T C G T C A C G T A C G T A C T A G C T A G A G C T G C T A
A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAKTWYMAWGGYW
YCATTAMC------
 A C G T A T G C C G T A C A T G A C G T C G T A A G T C G T C A C G T A C G T A C T A G C T A G A G C T G C T A
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T A C G T A C G T A C G T A C G T