Information for 11-GTTTGCATTCACA (Motif 24)

A C T G A C G T A C G T A C G T C T A G A G T C C G T A C G A T A G C T A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G C T G A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A G T C
p-value:1e-4
log p-value:-1.012e+01
Information Content per bp:1.942
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.3 +/- 28.8bp
Average Position of motif in Background23.4 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTTTGCATTCACA----
GACCACATTCATACAAT
 A C T G A C G T A C G T A C G T C T A G A G T C C G T A C G A T A G C T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTTTGCATTCACA
TTCATTTGCATAT---
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T C T A G A G T C C G T A C G A T A G C T A G T C C G T A A G T C C G T A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GTTTGCATTCACA
NNNTTTGTTTACATTTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C T A G A G T C C G T A C G A T A G C T A G T C C G T A A G T C C G T A
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T A C G T A C G T

PB0018.1_Foxk1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GTTTGCATTCACA
NNNTTTGTTTACATTTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C T A G A G T C C G T A C G A T A G C T A G T C C G T A A G T C C G T A
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTTTGCATTCACA
TNTAATTTGCATACNA-
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C T A G A G T C C G T A C G A T A G C T A G T C C G T A A G T C C G T A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTTTGCATTCACA
TNTAATTTGCATACNA-
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C T A G A G T C C G T A C G A T A G C T A G T C C G T A A G T C C G T A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTTTGCATTCACA
BTVATTWGCATA----
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T C T A G A G T C C G T A C G A T A G C T A G T C C G T A A G T C C G T A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTTTGCATTCACA
ATTTGCATAA---
 A C T G A C G T A C G T A C G T C T A G A G T C C G T A C G A T A G C T A G T C C G T A A G T C C G T A
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTTTGCATTCACA
TNTAATTTGCATANNN-
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C T A G A G T C C G T A C G A T A G C T A G T C C G T A A G T C C G T A
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGCATTCACA
TGTTTACTTT----
 A C G T A C T G A C G T A C G T A C G T C T A G A G T C C G T A C G A T A G C T A G T C C G T A A G T C C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T