Information for 5-TCTCCATGGAGAT (Motif 4)

C G A T A G T C G C A T A G T C A G T C G T C A C A G T T A C G A C T G C G T A T A C G T G C A G C A T
Reverse Opposite:
C G T A A C G T A T G C A C G T A G T C A T G C G T C A C A G T T C A G C T A G C G T A T A C G G C T A
p-value:1e-15
log p-value:-3.629e+01
Information Content per bp:1.657
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif101.2
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets52.6 +/- 27.1bp
Average Position of motif in Background52.4 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCTCCATGGAGAT
NGTCCCNNGGGA---
 A C G T A C G T C G A T A G T C G C A T A G T C A G T C G T C A C A G T T A C G A C T G C G T A T A C G T G C A G C A T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCTCCATGGAGAT
NGTTGCCATGGCAA-
 A C G T A C G T C G A T A G T C G C A T A G T C A G T C G T C A C A G T T A C G A C T G C G T A T A C G T G C A G C A T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCTCCATGGAGAT---
-TTTCCTGGAAAGNNN
 C G A T A G T C G C A T A G T C A G T C G T C A C A G T T A C G A C T G C G T A T A C G T G C A G C A T A C G T A C G T A C G T
A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTCCATGGAGAT
GGTTGCCATGGCAA-
 A C G T A C G T C G A T A G T C G C A T A G T C A G T C G T C A C A G T T A C G A C T G C G T A T A C G T G C A G C A T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCTCCATGGAGAT-
----NATGGAAAAN
 C G A T A G T C G C A T A G T C A G T C G T C A C A G T T A C G A C T G C G T A T A C G T G C A G C A T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCTCCATGGAGAT
GTTGCCATGGCAAC
 A C G T C G A T A G T C G C A T A G T C A G T C G T C A C A G T T A C G A C T G C G T A T A C G T G C A G C A T
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCTCCATGGAGAT
KGTTGCCATGGCAAC
 A C G T A C G T C G A T A G T C G C A T A G T C A G T C G T C A C A G T T A C G A C T G C G T A T A C G T G C A G C A T
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TCTCCATGGAGAT
------TGGAAAA
 C G A T A G T C G C A T A G T C A G T C G T C A C A G T T A C G A C T G C G T A T A C G T G C A G C A T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCCATGGAGAT---
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C G C A T A G T C A G T C G T C A C A G T T A C G A C T G C G T A T A C G T G C A G C A T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCTCCATGGAGAT
-CTTCTGGGAAA-
 C G A T A G T C G C A T A G T C A G T C G T C A C A G T T A C G A C T G C G T A T A C G T G C A G C A T
A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T