Information for 3-TRMCTKSGYWRCYCCT (Motif 5)

A C G T C T A G G T C A A G T C A G C T A C T G A T C G A C T G A G C T C G A T C T A G A G T C A G C T A G T C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C T G C T G A A C T G A G T C C G T A C T G A A G T C A T G C G T A C C T G A A C T G A C G T A G T C G T C A
p-value:1e-12
log p-value:-2.906e+01
Information Content per bp:1.791
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.4 +/- 17.1bp
Average Position of motif in Background54.8 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TRMCTKSGYWRCYCCT
WDNCTGGGCA------
 A C G T C T A G G T C A A G T C A G C T A C T G A T C G A C T G A G C T C G A T C T A G A G T C A G C T A G T C A G T C A G C T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:2
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TRMCTKSGYWRCYCCT--
--------TTCCCCCTAC
 A C G T C T A G G T C A A G T C A G C T A C T G A T C G A C T G A G C T C G A T C T A G A G T C A G C T A G T C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TRMCTKSGYWRCYCCT
TACCCTAGTTACCGA-
 A C G T C T A G G T C A A G T C A G C T A C T G A T C G A C T G A G C T C G A T C T A G A G T C A G C T A G T C A G T C A G C T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TRMCTKSGYWRCYCCT---
----NNGGCCACGCCTTTN
 A C G T C T A G G T C A A G T C A G C T A C T G A T C G A C T G A G C T C G A T C T A G A G T C A G C T A G T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TRMCTKSGYWRCYCCT
TTGCCATGGCAACN---
 A C G T A C G T C T A G G T C A A G T C A G C T A C T G A T C G A C T G A G C T C G A T C T A G A G T C A G C T A G T C A G T C A G C T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TRMCTKSGYWRCYCCT
TTGCCATGGCAACC---
 A C G T A C G T C T A G G T C A A G T C A G C T A C T G A T C G A C T G A G C T C G A T C T A G A G T C A G C T A G T C A G T C A G C T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TRMCTKSGYWRCYCCT---
--NNNNGGTACCCCCCANN
 A C G T C T A G G T C A A G T C A G C T A C T G A T C G A C T G A G C T C G A T C T A G A G T C A G C T A G T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TRMCTKSGYWRCYCCT
GTTGCCATGGCAAC----
 A C G T A C G T A C G T C T A G G T C A A G T C A G C T A C T G A T C G A C T G A G C T C G A T C T A G A G T C A G C T A G T C A G T C A G C T
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----TRMCTKSGYWRCYCCT---
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T C T A G G T C A A G T C A G C T A C T G A T C G A C T G A G C T C G A T C T A G A G T C A G C T A G T C A G T C A G C T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.49
Offset:6
Orientation:forward strand
Alignment:TRMCTKSGYWRCYCCT
------CNGTCCTCCC
 A C G T C T A G G T C A A G T C A G C T A C T G A T C G A C T G A G C T C G A T C T A G A G T C A G C T A G T C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C