p-value: | 1e-2 |
log p-value: | -4.715e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 1.0 |
Percentage of Target Sequences with motif | 0.25% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 74.0 +/- 15.0bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 2.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCCTGACCTGACT ---TGACCTYA-- |
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RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 2 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCCTGACCTGACT TGACCTTGACCT---- |
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RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCCTGACCTGACT TGACCTTGACCT---- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCCTGACCTGACT ---TGACCT---- |
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ZEB1/MA0103.2/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCCTGACCTGACT -CCTCACCTG--- |
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PB0157.1_Rara_2/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCCTGACCTGACT-- NNCNTGACCCCGCTCT |
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CRE(bZIP)/Promoter/Homer
Match Rank: | 7 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCCTGACCTGACT CGGTGACGTCAC- |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCCTGACCTGACT ---TGACCTARTT |
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RORA/MA0071.1/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCCTGACCTGACT ---TGACCTTGAT |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCCTGACCTGACT-- NNNNTGACCCGGCGCG |
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