Homer de novo Motif Results (hs_Embryonic_HUES64_normal_OTX2_SRX702050_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 678
Total background sequences = 46040
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T G A C A T C G G A C T C G A T C G T A C G T A A C G T A G T C G A T C A G C T A G C T A G C T G T A C 1e-222-5.116e+0257.08%8.71%18.1bp (35.2bp)Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer(0.976)
More Information | Similar Motifs Found		motif file (matrix)
2 A G C T C G A T T C A G G A C T A G C T C G T A C G A T A C T G A G T C G C T A C T G A T C G A G C A T 1e-41-9.533e+018.26%0.65%25.9bp (30.5bp)OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer(0.942)
More Information | Similar Motifs Found		motif file (matrix)
3 C A G T T A G C G C T A G T A C C G T A T A C G A G T C C G T A C A T G A C T G 1e-27-6.229e+0112.39%2.97%24.9bp (30.9bp)PB0205.1_Zic1_2/Jaspar(0.904)
More Information | Similar Motifs Found		motif file (matrix)
4 A G T C T G A C G A T C T A G C G A T C G C A T C A T G C A T G C T A G C T A G 1e-18-4.165e+0115.63%6.07%23.8bp (30.5bp)EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer(0.907)
More Information | Similar Motifs Found		motif file (matrix)
5 A G C T A T G C G T A C G T C A C T G A C A T G C T A G A T C G A T C G C T G A A C G T A C G T C G A T 1e-17-4.074e+017.23%1.55%24.8bp (30.2bp)EBF1/MA0154.3/Jaspar(0.693)
More Information | Similar Motifs Found		motif file (matrix)
6 T A C G A C G T G A T C C T G A C T A G C G T A C T A G A G T C C G T A C G T A C G T A C T A G C G T A G T A C G A T C G T A C 1e-16-3.810e+011.03%0.00%22.8bp (0.0bp)PB0071.1_Sox4_1/Jaspar(0.646)
More Information | Similar Motifs Found		motif file (matrix)
7 A C T G A T G C C G A T G C T A C T G A A C T G C A T G A C T G C G T A A C G T C G A T C G T A G A C T A C T G G T C A C T G A 1e-13-3.192e+010.88%0.00%19.0bp (22.4bp)Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer(0.635)
More Information | Similar Motifs Found		motif file (matrix)
8 A G T C C G T A A T C G A G T C G C A T A T C G C T A G A T G C A C G T A G C T A G C T A G T C G A C T 1e-13-3.183e+012.95%0.28%22.6bp (27.2bp)Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer(0.681)
More Information | Similar Motifs Found		motif file (matrix)
9 C G A T A C T G A T C G G C T A C T G A C G A T A T C G G A C T A C G T T C A G 1e-13-3.125e+014.87%0.92%26.3bp (31.0bp)TEAD3/MA0808.1/Jaspar(0.853)
More Information | Similar Motifs Found		motif file (matrix)
10 C T A G A C T G A G T C G T C A A C G T A G C T A C G T A T G C A C G T A C G T A G T C A G T C A T C G 1e-12-2.778e+010.88%0.01%19.7bp (14.2bp)PB0011.1_Ehf_1/Jaspar(0.620)
More Information | Similar Motifs Found		motif file (matrix)
11 * A C T G C G T A C G T A A C G T A C T G A T G C G T A C C G T A A C G T A C G T C G A T A C T G A T C G 1e-11-2.724e+012.36%0.20%24.7bp (30.1bp)Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer(0.761)
More Information | Similar Motifs Found		motif file (matrix)
12 * C G T A C G T A A C G T A C G T A C T G A C G T C G T A G T C A C G T A A G T C G T C A A T C G A C G T 1e-11-2.591e+010.74%0.00%25.0bp (0.0bp)SRY/MA0084.1/Jaspar(0.705)
More Information | Similar Motifs Found		motif file (matrix)
13 * A C G T A C G T A C G T A C T G A C G T A G C T A C G T C G T A A C G T A G T C C G T A T C A G A C T G 1e-11-2.591e+010.74%0.00%32.7bp (0.0bp)PB0016.1_Foxj1_1/Jaspar(0.686)
More Information | Similar Motifs Found		motif file (matrix)
14 * C G A T C T G A A G T C C G T A C T G A A C T G C G T A C G T A C T G A C T A G A C T G G T A C A C G T A G T C C G T A A G T C 1e-11-2.591e+010.74%0.00%34.6bp (7.3bp)PB0137.1_Irf3_2/Jaspar(0.542)
More Information | Similar Motifs Found		motif file (matrix)
15 * C G T A A T C G C G T A T A G C C G T A C G T A A C G T A C T G A C T G A C G T 1e-11-2.584e+012.21%0.18%26.5bp (29.9bp)PB0168.1_Sox14_2/Jaspar(0.842)
More Information | Similar Motifs Found		motif file (matrix)
16 * A G T C G A T C G A C T A C G T A G C T A C G T A C T G C G A T A T G C C G T A 1e-10-2.487e+012.80%0.36%31.5bp (29.4bp)Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer(0.728)
More Information | Similar Motifs Found		motif file (matrix)
17 * A G C T C G T A T C G A A T G C G T C A C G T A A C T G C A T G C G A T C G T A G T C A C G A T A T C G A G T C A G T C C G T A 1e-10-2.363e+011.03%0.02%20.3bp (29.2bp)Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer(0.542)
More Information | Similar Motifs Found		motif file (matrix)
18 * A C T G C T A G C T G A C G T A A C G T A C G T A G T C G T C A A G C T A G T C A G T C A G T C C G T A 1e-9-2.245e+010.74%0.01%19.6bp (7.4bp)PB0171.1_Sox18_2/Jaspar(0.664)
More Information | Similar Motifs Found		motif file (matrix)
19 * C T A G A T G C G T A C A G C T A C G T A C G T G T C A A G T C C G T A A C T G C G T A A C T G A G T C 1e-9-2.245e+010.74%0.00%30.7bp (11.8bp)TATA-Box(TBP)/Promoter/Homer(0.582)
More Information | Similar Motifs Found		motif file (matrix)
20 * C G T A G T C A A C T G A C T G C A G T A G T C C G T A A G T C A C G T C T G A C G T A A T C G A G T C 1e-9-2.232e+010.88%0.01%19.9bp (6.3bp)ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer(0.708)
More Information | Similar Motifs Found		motif file (matrix)
21 * A C G T A C G T C G A T A C T G A G T C C G T A T C A G A G T C C G T A G T A C A G T C G T C A A C G T 1e-8-2.030e+011.03%0.03%26.0bp (37.1bp)CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer(0.772)
More Information | Similar Motifs Found		motif file (matrix)
22 * T A C G A G C T C G A T G A C T A C G T A C T G A C G T A C G T C A G T G T A C C G T A T A C G C T A G A C T G G A T C C G A T 1e-8-1.928e+011.47%0.11%18.6bp (26.2bp)Sox3/MA0514.1/Jaspar(0.600)
More Information | Similar Motifs Found		motif file (matrix)
23 * A C T G A T G C C T A G A C T G C A T G C T A G T C G A A C T G C G T A A C T G A T G C C T A G C T A G G T C A A T C G A G C T 1e-8-1.888e+011.03%0.04%16.3bp (25.6bp)Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer(0.612)
More Information | Similar Motifs Found		motif file (matrix)
24 * A T C G C G T A C T A G A G T C A G C T A C G T C G T A T A C G A G C T C A G T 1e-7-1.647e+016.34%2.53%25.8bp (33.9bp)POL010.1_DCE_S_III/Jaspar(0.681)
More Information | Similar Motifs Found		motif file (matrix)