Information for 8-AATTGTWMACMST (Motif 12)

C G T A C G T A A C G T A C G T A C T G A C G T C G T A G T C A C G T A A G T C G T C A A T C G A C G T
Reverse Opposite:
C G T A A T G C A C G T A C T G A C G T A C G T C G A T C G T A A G T C C G T A G T C A A C G T A C G T
p-value:1e-11
log p-value:-2.591e+01
Information Content per bp:1.872
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.2 +/- 25.0bp
Average Position of motif in Background40.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AATTGTWMACMST
-ATTGTTTAN---
 C G T A C G T A A C G T A C G T A C T G A C G T C G T A G T C A C G T A A G T C G T C A A T C G A C G T
A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AATTGTWMACMST
AAAATTGTTATGAA-
 A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C G T C G T A G T C A C G T A A G T C G T C A A T C G A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AATTGTWMACMST---
TGATTGTTAACAGTTGG
 A C G T C G T A C G T A A C G T A C G T A C T G A C G T C G T A G T C A C G T A A G T C G T C A A T C G A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

PB0065.1_Sox15_1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----AATTGTWMACMST
ANNTCTATTGTTCNNNA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C G T C G T A G T C A C G T A A G T C G T C A A T C G A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AATTGTWMACMST
GGAAAAATTGTTAGGAA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C G T C G T A G T C A C G T A A G T C G T C A A T C G A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AATTGTWMACMST
CTATAATTGTTAGCG--
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C G T C G T A G T C A C G T A A G T C G T C A A T C G A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:7
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AATTGTWMACMST
NNATNAATTGTTTNN---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C G T C G T A G T C A C G T A A G T C G T C A A T C G A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AATTGTWMACMST
TTCAATTGTTCTAAAA
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C G T C G T A G T C A C G T A A G T C G T C A A T C G A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AATTGTWMACMST
-ATTGTTA-----
 C G T A C G T A A C G T A C G T A C T G A C G T C G T A G T C A C G T A A G T C G T C A A T C G A C G T
A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AATTGTWMACMST
-ATTGTT------
 C G T A C G T A A C G T A C G T A C T G A C G T C G T A G T C A C G T A A G T C G T C A A T C G A C G T
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T