Information for 4-GTCAGARCAAAGACCC (Motif 6)

T A C G A C G T G A T C C T G A C T A G C G T A C T A G A G T C C G T A C G T A C G T A C T A G C G T A G T A C G A T C G T A C
Reverse Opposite:
A C T G C T A G A C T G C G A T A G T C A C G T A C G T C G A T T A C G A G T C A C G T A G T C A G C T C A T G G T C A A T G C
p-value:1e-16
log p-value:-3.810e+01
Information Content per bp:1.739
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.9 +/- 22.8bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTCAGARCAAAGACCC-
AGAAGAACAAAGGACTA
 T A C G A C G T G A T C C T G A C T A G C G T A C T A G A G T C C G T A C G T A C G T A C T A G C G T A G T A C G A T C G T A C A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTCAGARCAAAGACCC-
ATAAGAACAAAGGACTA
 T A C G A C G T G A T C C T G A C T A G C G T A C T A G A G T C C G T A C G T A C G T A C T A G C G T A G T A C G A T C G T A C A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GTCAGARCAAAGACCC
---GGAACAAAGR---
 T A C G A C G T G A T C C T G A C T A G C G T A C T A G A G T C C G T A C G T A C G T A C T A G C G T A G T A C G A T C G T A C
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCAGARCAAAGACCC-
NANAGATCAAAGGGNNN
 T A C G A C G T G A T C C T G A C T A G C G T A C T A G A G T C C G T A C G T A C G T A C T A G C G T A G T A C G A T C G T A C A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTCAGARCAAAGACCC
-AGAGTCCAAAGTCCA
 T A C G A C G T G A T C C T G A C T A G C G T A C T A G A G T C C G T A C G T A C G T A C T A G C G T A G T A C G A T C G T A C
A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTCAGARCAAAGACCC
---AAAACAAAGG---
 T A C G A C G T G A T C C T G A C T A G C G T A C T A G A G T C C G T A C G T A C G T A C T A G C G T A G T A C G A T C G T A C
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTCAGARCAAAGACCC-
NNNAGATCAAAGGANNN
 T A C G A C G T G A T C C T G A C T A G C G T A C T A G A G T C C G T A C G T A C G T A C T A G C G T A G T A C G A T C G T A C A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTCAGARCAAAGACCC
---ACATCAAAGGNA-
 T A C G A C G T G A T C C T G A C T A G C G T A C T A G A G T C C G T A C G T A C G T A C T A G C G T A G T A C G A T C G T A C
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTCAGARCAAAGACCC
CANAGNNCAAAGTCCA
 T A C G A C G T G A T C C T G A C T A G C G T A C T A G A G T C C G T A C G T A C G T A C T A G C G T A G T A C G A T C G T A C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTCAGARCAAAGACCC
-AAAGATCAAAGG---
 T A C G A C G T G A T C C T G A C T A G C G T A C T A G A G T C C G T A C G T A C G T A C T A G C G T A G T A C G A T C G T A C
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T