Information for 10-TAACAAGGTAATGCYA (Motif 17)

A G C T C G T A T C G A A T G C G T C A C G T A A C T G C A T G C G A T C G T A G T C A C G A T A T C G A G T C A G T C C G T A
Reverse Opposite:
A C G T C T A G C T A G T A G C C G T A A C G T A C G T C G T A G A T C A G T C C G A T A C G T A T C G A G C T A C G T C T G A
p-value:1e-10
log p-value:-2.363e+01
Information Content per bp:1.762
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.1 +/- 20.3bp
Average Position of motif in Background57.6 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:1
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TAACAAGGTAATGCYA--
ANTTMRCASBNNNGTGYKAAN
 A C G T A C G T A C G T A G C T C G T A T C G A A T G C G T C A C G T A A C T G C A T G C G A T C G T A G T C A C G A T A T C G A G T C A G T C C G T A A C G T A C G T
C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TAACAAGGTAATGCYA
---CAAGGHCANV---
 A G C T C G T A T C G A A T G C G T C A C G T A A C T G C A T G C G A T C G T A G T C A C G A T A T C G A G T C A G T C C G T A
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TAACAAGGTAATGCYA
--TCAAGGTCAT----
 A G C T C G T A T C G A A T G C G T C A C G T A A C T G C A T G C G A T C G T A G T C A C G A T A T C G A G T C A G T C C G T A
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TAACAAGGTAATGCYA
TATTCAAGGTCATGCGA
 A C G T A G C T C G T A T C G A A T G C G T C A C G T A A C T G C A T G C G A T C G T A G T C A C G A T A T C G A G T C A G T C C G T A
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TAACAAGGTAATGCYA
---TATGCWAATBAV-
 A G C T C G T A T C G A A T G C G T C A C G T A A C T G C A T G C G A T C G T A G T C A C G A T A T C G A G T C A G T C C G T A
A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TAACAAGGTAATGCYA--
--GNNAGCTAATCCCCCN
 A G C T C G T A T C G A A T G C G T C A C G T A A C T G C A T G C G A T C G T A G T C A C G A T A T C G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.50
Offset:8
Orientation:forward strand
Alignment:TAACAAGGTAATGCYA
--------TAATCCCN
 A G C T C G T A T C G A A T G C G T C A C G T A A C T G C A T G C G A T C G T A G T C A C G A T A T C G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

POU2F1/MA0785.1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TAACAAGGTAATGCYA
-AATATGCAAATT---
 A G C T C G T A T C G A A T G C G T C A C G T A A C T G C A T G C G A T C G T A G T C A C G A T A T C G A G T C A G T C C G T A
A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TAACAAGGTAATGCYA
--TCAAGGTCATA---
 A G C T C G T A T C G A A T G C G T C A C G T A A C T G C A T G C G A T C G T A G T C A C G A T A T C G A G T C A G T C C G T A
A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TAACAAGGTAATGCYA-
--AGATGCTRCTRCCHT
 A G C T C G T A T C G A A T G C G T C A C G T A A C T G C A T G C G A T C G T A G T C A C G A T A T C G A G T C A G T C C G T A A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T