Information for 12-AGACAATGGT (Motif 15)

C G T A A T C G C G T A T A G C C G T A C G T A A C G T A C T G A C T G A C G T
Reverse Opposite:
T G C A A G T C G T A C C G T A A C G T A C G T A T C G G C A T A T G C A C G T
p-value:1e-11
log p-value:-2.584e+01
Information Content per bp:1.855
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif85.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets64.2 +/- 26.5bp
Average Position of motif in Background48.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---AGACAATGGT--
CTCACACAATGGCGC
 A C G T A C G T A C G T C G T A A T C G C G T A T A G C C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:2
Score:0.84
Offset:0
Orientation:forward strand
Alignment:AGACAATGGT
RAACAATGGN
 C G T A A T C G C G T A T A G C C G T A C G T A A C G T A C T G A C T G A C G T
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-AGACAATGGT
AAAACAATGG-
 A C G T C G T A A T C G C G T A T A G C C G T A C G T A A C G T A C T G A C T G A C G T
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-AGACAATGGT
VRAACAATGG-
 A C G T C G T A A T C G C G T A T A G C C G T A C G T A A C G T A C T G A C T G A C G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:AGACAATGGT
-GACAATGNN
 C G T A A T C G C G T A T A G C C G T A C G T A A C G T A C T G A C T G A C G T
A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:AGACAATGGT
-AACAAAGG-
 C G T A A T C G C G T A T A G C C G T A C G T A A C G T A C T G A C T G A C G T
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:AGACAATGGT
-RACAAWGG-
 C G T A A T C G C G T A T A G C C G T A C G T A A C G T A C T G A C T G A C G T
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---AGACAATGGT----
NNTNNACAATGGGANNN
 A C G T A C G T A C G T C G T A A T C G C G T A T A G C C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:AGACAATGGT
GAACAATGG-
 C G T A A T C G C G T A T A G C C G T A C G T A A C G T A C T G A C T G A C G T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AGACAATGGT
VRRACAAWGG-
 A C G T C G T A A T C G C G T A T A G C C G T A C G T A A C G T A C T G A C T G A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T