Information for 12-AAGGTCACTAAGC (Motif 20)

C G T A G T C A A C T G A C T G C A G T A G T C C G T A A G T C A C G T C T G A C G T A A T C G A G T C
Reverse Opposite:
A C T G A T G C A C G T A G C T C G T A A C T G A C G T A C T G G T C A T G A C G T A C A C G T A C G T
p-value:1e-9
log p-value:-2.232e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 19.9bp
Average Position of motif in Background40.6 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AAGGTCACTAAGC
-RGGGCACTAACY
 C G T A G T C A A C T G A C T G C A G T A G T C C G T A A G T C A C G T C T G A C G T A A T C G A G T C
A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAGGTCACTAAGC-
NAGGTCANTGACCT
 C G T A G T C A A C T G A C T G C A G T A G T C C G T A A G T C A C G T C T G A C G T A A T C G A G T C A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AAGGTCACTAAGC
-AGGTCTCTAACC
 C G T A G T C A A C T G A C T G C A G T A G T C C G T A A G T C A C G T C T G A C G T A A T C G A G T C
A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAGGTCACTAAGC
AAGGTCAC-----
 C G T A G T C A A C T G A C T G C A G T A G T C C G T A A G T C A C G T C T G A C G T A A T C G A G T C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAGGTCACTAAGC
TCAAGGTCAN-----
 A C G T A C G T C G T A G T C A A C T G A C T G C A G T A G T C C G T A A G T C A C G T C T G A C G T A A T C G A G T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGGTCACTAAGC
TCAAGGTCAT-----
 A C G T A C G T C G T A G T C A A C T G A C T G C A G T A G T C C G T A A G T C A C G T C T G A C G T A A T C G A G T C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AAGGTCACTAAGC
TCTCAAAGGTCACCTG--
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C T G A C T G C A G T A G T C C G T A A G T C A C G T C T G A C G T A A T C G A G T C
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AAGGTCACTAAGC
ANGNAAAGGTCA------
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C T G A C T G C A G T A G T C C G T A A G T C A C G T C T G A C G T A A T C G A G T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGGTCACTAAGC
CAAAGGTCAG-----
 A C G T A C G T C G T A G T C A A C T G A C T G C A G T A G T C C G T A A G T C A C G T C T G A C G T A A T C G A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGGTCACTAAGC
CAAGGHCANV----
 A C G T C G T A G T C A A C T G A C T G C A G T A G T C C G T A A G T C A C G T C T G A C G T A A T C G A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T