Information for 3-TCCAAGGGGATTT (Motif 5)

A G C T A T G C G T A C G T C A C T G A C A T G C T A G A T C G A T C G C T G A A C G T A C G T C G A T
Reverse Opposite:
G C T A G T C A C G T A G A C T T A G C A T G C A G T C G A T C A G C T C A G T C A T G T A C G T C G A
p-value:1e-17
log p-value:-4.074e+01
Information Content per bp:1.640
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif7.23%
Number of Background Sequences with motif713.3
Percentage of Background Sequences with motif1.55%
Average Position of motif in Targets48.8 +/- 24.8bp
Average Position of motif in Background49.8 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.3/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TCCAAGGGGATTT
ANTCCCTNGGGAAT-
 A C G T A C G T A G C T A T G C G T A C G T C A C T G A C A T G C T A G A T C G A T C G C T G A A C G T A C G T C G A T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TCCAAGGGGATTT-
---AAGAGGATTAG
 A G C T A T G C G T A C G T C A C T G A C A T G C T A G A T C G A T C G C T G A A C G T A C G T C G A T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0121.1_Obox1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCCAAGGGGATTT-----
-TTAAGGGGATTAACTAC
 A G C T A T G C G T A C G T C A C T G A C A T G C T A G A T C G A T C G C T G A A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCCAAGGGGATTT
NGTCCCNNGGGA---
 A C G T A C G T A G C T A T G C G T A C G T C A C T G A C A T G C T A G A T C G A T C G C T G A A C G T A C G T C G A T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TCCAAGGGGATTT---
----NGGGGATTTCCC
 A G C T A T G C G T A C G T C A C T G A C A T G C T A G A T C G A T C G C T G A A C G T A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCCAAGGGGATTT
GTCCCCAGGGGA---
 A C G T A C G T A G C T A T G C G T A C G T C A C T G A C A T G C T A G A T C G A T C G C T G A A C G T A C G T C G A T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCCAAGGGGATTT----
-CGTTGGGGATTAGCCT
 A G C T A T G C G T A C G T C A C T G A C A T G C T A G A T C G A T C G C T G A A C G T A C G T C G A T A C G T A C G T A C G T A C G T
A C G T A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TCCAAGGGGATTT--
-----GGGGATTTCC
 A G C T A T G C G T A C G T C A C T G A C A T G C T A G A T C G A T C G C T G A A C G T A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

PH0137.1_Pitx1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCCAAGGGGATTT-----
-TTAGAGGGATTAACAAT
 A G C T A T G C G T A C G T C A C T G A C A T G C T A G A T C G A T C G C T G A A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCCAAGGGGATTT------
---AGGGGGATTAGCTGCC
 A G C T A T G C G T A C G T C A C T G A C A T G C T A G A T C G A T C G C T G A A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C