Homer de novo Motif Results (hs_EmbryonicEndoderm_HUES64_normal_PRDM1_SRX701958_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 690
Total background sequences = 47775
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G T A C T G C A T G A C A G C T A G C T A C G T A G T C G C T A G A T C A G C T A G C T C G A T A G T C 1e-357-8.229e+0243.62%1.39%21.6bp (32.9bp)PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer(0.980)
More Information | Similar Motifs Found
motif file (matrix)
2 A G T C A C G T A G T C C G A T A C T G A G T C C G T A A C T G A T C G C G T A A T C G A C T G A T G C 1e-17-4.114e+011.30%0.01%26.8bp (11.3bp)Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer(0.775)
More Information | Similar Motifs Found
motif file (matrix)
3 C G T A C G A T A G T C T A C G A C G T C G A T C G T A C G T A G A T C C G T A A G C T A C G T A T G C A G C T A G C T C G A T 1e-16-3.903e+011.16%0.01%23.9bp (8.9bp)FOXF2/MA0030.1/Jaspar(0.576)
More Information | Similar Motifs Found
motif file (matrix)
4 G T C A A T G C C G A T A C T G G T C A G A C T C G T A C G T A A C T G C T G A 1e-14-3.296e+012.32%0.14%18.3bp (23.4bp)PB0022.1_Gata5_1/Jaspar(0.913)
More Information | Similar Motifs Found
motif file (matrix)
5 A C G T A C T G G T A C A T G C C G A T A C G T A C G T C G T A T C G A A T G C C G T A A C T G A C T G A C G T A C T G C T G A 1e-13-3.204e+010.87%0.00%27.0bp (0.0bp)PH0068.1_Hoxc13/Jaspar(0.574)
More Information | Similar Motifs Found
motif file (matrix)
6 * G T A C C G T A G T A C C G T A A C T G G A T C C G T A A T C G C T A G A T C G 1e-11-2.681e+012.90%0.36%30.6bp (30.7bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.916)
More Information | Similar Motifs Found
motif file (matrix)
7 * C G T A A G T C C G T A A G T C A T G C A C G T A C T G A T G C A C G T A C G T A C T G C G T A A C G T 1e-11-2.600e+010.72%0.00%32.3bp (0.0bp)MF0007.1_bHLH(zip)_class/Jaspar(0.746)
More Information | Similar Motifs Found
motif file (matrix)
8 * G A T C G A T C G T A C G C T A C T A G T A C G G T C A T A G C G A T C G A C T T G C A T C G A T A G C G C T A A T G C G A T C 1e-11-2.600e+010.72%0.00%14.4bp (18.5bp)TBX5/MA0807.1/Jaspar(0.547)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G T A A C G T A C G T A T C G A G C T G T C A C T G A A G C T A G T C A G T C A G T C A G C T C T A G A C T G A C T G A C T G 1e-11-2.600e+010.72%0.00%24.3bp (0.0bp)EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer(0.700)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G A T A G T C C G A T C A T G C G A T C T G A C G A T T C G A C T G A G T A C C G T A C G T A G A T C A G C T T C G A C T G A 1e-10-2.376e+010.87%0.01%28.9bp (16.2bp)PB0187.1_Tcf7_2/Jaspar(0.596)
More Information | Similar Motifs Found
motif file (matrix)
11 * C T A G A C T G A C G T A C T G C A G T T A G C C G T A C G T A T C G A C G T A A G T C A G T C C G T A 1e-10-2.346e+011.30%0.05%23.1bp (28.7bp)Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer(0.653)
More Information | Similar Motifs Found
motif file (matrix)
12 * C T A G G T A C C G T A C G T A A C G T A T C G A G T C A C G T A C G T A C G T G C T A C G T A A G C T A C G T C G T A C T G A 1e-9-2.255e+010.72%0.00%27.8bp (13.4bp)PH0095.1_Lhx5/Jaspar(0.663)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C T G A G C T A C G T A C T G A G T C G T A C A C G T A C T G A C G T C G A T A G T C A G T C A T C G 1e-9-2.135e+010.87%0.01%30.5bp (31.7bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.675)
More Information | Similar Motifs Found
motif file (matrix)
14 * C A T G G C T A G A C T C T G A T C G A T G A C T C G A C G T A C G A T C A T G 1e-8-2.068e+0111.59%5.60%26.8bp (28.0bp)Sox5/MA0087.1/Jaspar(0.821)
More Information | Similar Motifs Found
motif file (matrix)
15 * A G T C G T A C A T C G A C T G C G A T A G T C A C T G C G A T A G T C C G T A 1e-8-2.053e+010.72%0.01%25.2bp (15.8bp)CREB1/MA0018.2/Jaspar(0.741)
More Information | Similar Motifs Found
motif file (matrix)
16 * A G T C A C G T A C T G C G T A A G T C A G T C C G T A C G A T A C T G C G T A G T A C A C G T A G T C 1e-8-2.015e+010.58%0.00%29.1bp (0.0bp)Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer(0.711)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A T A G C G T C A A C T G A G C T C G T A A T C G C A G T A T C G A C G T A C T G C G T A C T G A C A G T C A T G C G T A 1e-8-2.015e+010.58%0.00%27.8bp (6.5bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.531)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G T C A C G T A C T G A C T G T G A C C G T A A G T C A C T G A C T G A G C T A C T G A T C G A C T G A C T G C T A G A G T C 1e-8-2.015e+010.58%0.00%24.7bp (0.0bp)Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer(0.618)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C G T C G T A A C T G A G T C A C G T G C T A C G T A C T G A C T A G C T G A A C G T C G T A A C T G 1e-8-1.965e+010.87%0.02%21.0bp (36.9bp)MEF2B/MA0660.1/Jaspar(0.767)
More Information | Similar Motifs Found
motif file (matrix)
20 * C T G A A C T G C T A G C T G A A C T G C T G A G T C A C G T A C T G A C T A G A C T G A C T G G T C A 1e-7-1.771e+013.04%0.68%28.4bp (29.2bp)Pparg::Rxra/MA0065.2/Jaspar(0.581)
More Information | Similar Motifs Found
motif file (matrix)
21 * A T C G C G T A G A T C A C G T C G T A C G A T A T G C G T C A A C G T C G T A 1e-7-1.753e+011.74%0.20%28.8bp (26.3bp)PB0174.1_Sox30_2/Jaspar(0.600)
More Information | Similar Motifs Found
motif file (matrix)
22 * A C T G A G T C A C G T C G T A C G T A G T A C A C G T C G T A G A C T C G T A A G T C C G T A C G A T 1e-7-1.739e+010.58%0.01%6.3bp (23.0bp)PH0168.1_Hnf1b/Jaspar(0.603)
More Information | Similar Motifs Found
motif file (matrix)
23 * A G T C A G T C C G T A C G A T A G T C C G T A A C T G A C G T C T A G C G T A C G A T C G A T A G T C 1e-7-1.739e+010.58%0.01%33.7bp (14.2bp)Gfi1/MA0038.1/Jaspar(0.633)
More Information | Similar Motifs Found
motif file (matrix)
24 * A T C G C G T A A C T G C T G A C T A G T G A C G C A T T C G A C G T A A T G C C A T G T C A G A C T G 1e-7-1.678e+012.46%0.47%24.1bp (28.6bp)Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer(0.582)
More Information | Similar Motifs Found
motif file (matrix)
25 * C A G T A T C G C G A T C G A T A C G T C T A G A G C T G C A T A C G T T C A G 1e-6-1.606e+014.20%1.33%24.9bp (28.8bp)Foxd3/MA0041.1/Jaspar(0.829)
More Information | Similar Motifs Found
motif file (matrix)
26 * G T A C C G T A A G T C A C T G A C G T C G T A C G T A A C G T A G T C A C G T A C G T A G T C C G T A 1e-6-1.578e+010.58%0.01%13.4bp (17.5bp)Atf3/MA0605.1/Jaspar(0.621)
More Information | Similar Motifs Found
motif file (matrix)
27 * A G C T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C T G A G T C 1e-6-1.511e+010.72%0.02%18.4bp (26.7bp)PB0190.1_Tcfap2b_2/Jaspar(0.729)
More Information | Similar Motifs Found
motif file (matrix)
28 * T G C A C G T A C G T A C G T A C T A G A G T C G T C A C G T A C T A G G C T A C T A G C A G T A C T G 1e-5-1.333e+011.59%0.25%16.6bp (35.5bp)SD0002.1_at_AC_acceptor/Jaspar(0.609)
More Information | Similar Motifs Found
motif file (matrix)
29 * G T C A C T G A A T C G C G T A T C A G T C G A A T G C G C T A G T A C G C A T T A C G G C T A T G A C 1e-5-1.195e+012.17%0.53%27.5bp (33.4bp)Sox6/MA0515.1/Jaspar(0.587)
More Information | Similar Motifs Found
motif file (matrix)