Information for 12-TCTGTATAACAACYAA (Motif 10)

C G A T A G T C C G A T C A T G C G A T C T G A C G A T T C G A C T G A G T A C C G T A C G T A G A T C A G C T T C G A C T G A
Reverse Opposite:
A G C T A C G T C T G A C T A G A C G T A C G T A C T G A G C T A C G T C G T A A G C T C G T A G T A C C G T A C T A G C G T A
p-value:1e-10
log p-value:-2.376e+01
Information Content per bp:1.728
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 28.9bp
Average Position of motif in Background67.4 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCTGTATAACAACYAA
-CCGTATTATAAACAA
 C G A T A G T C C G A T C A T G C G A T C T G A C G A T T C G A C T G A G T A C C G T A C G T A G A T C A G C T T C G A C T G A
A C G T G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCTGTATAACAACYAA
ATTTGCATAACAAAG--
 A C G T C G A T A G T C C G A T C A T G C G A T C T G A C G A T T C G A C T G A G T A C C G T A C G T A G A T C A G C T T C G A C T G A
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCTGTATAACAACYAA
ATTTGCATAACAATG--
 A C G T C G A T A G T C C G A T C A T G C G A T C T G A C G A T T C G A C T G A G T A C C G T A C G T A G A T C A G C T T C G A C T G A
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCTGTATAACAACYAA
-NTTNAGAACAATTA-
 C G A T A G T C C G A T C A T G C G A T C T G A C G A T T C G A C T G A G T A C C G T A C G T A G A T C A G C T T C G A C T G A
A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCTGTATAACAACYAA---
--TNNAGAACAATANATNN
 C G A T A G T C C G A T C A T G C G A T C T G A C G A T T C G A C T G A G T A C C G T A C G T A G A T C A G C T T C G A C T G A A C G T A C G T A C G T
A C G T A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0065.1_Sox15_1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCTGTATAACAACYAA---
--TAGTGAACAATAGATTT
 C G A T A G T C C G A T C A T G C G A T C T G A C G A T T C G A C T G A G T A C C G T A C G T A G A T C A G C T T C G A C T G A A C G T A C G T A C G T
A C G T A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TCTGTATAACAACYAA
-----RNAACAATGG-
 C G A T A G T C C G A T C A T G C G A T C T G A C G A T T C G A C T G A G T A C C G T A C G T A G A T C A G C T T C G A C T G A
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TCTGTATAACAACYAA--
---NNNTAACAATTATAN
 C G A T A G T C C G A T C A T G C G A T C T G A C G A T T C G A C T G A G T A C C G T A C G T A G A T C A G C T T C G A C T G A A C G T A C G T
A C G T A C G T A C G T A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0073.1_Sox7_1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCTGTATAACAACYAA------
AATAAAGAACAATAGAATTTCA
 C G A T A G T C C G A T C A T G C G A T C T G A C G A T T C G A C T G A G T A C C G T A C G T A G A T C A G C T T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCTGTATAACAACYAA--
--TTTAGAACAATAAAAT
 C G A T A G T C C G A T C A T G C G A T C T G A C G A T T C G A C T G A G T A C C G T A C G T A G A T C A G C T T C G A C T G A A C G T A C G T
A C G T A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T