Information for 13-KYTGYMTGTWCCS (Motif 13)

A C T G A G C T A C G T A C T G A G T C G T A C A C G T A C T G A C G T C G A T A G T C A G T C A T C G
Reverse Opposite:
A T C G A C T G A C T G C G A T C G T A A G T C C G T A A C T G C T A G A G T C G T C A C T G A G T A C
p-value:1e-9
log p-value:-2.135e+01
Information Content per bp:1.824
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.8 +/- 30.5bp
Average Position of motif in Background57.4 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:KYTGYMTGTWCCS--
-----CTGTTCCTGG
 A C T G A G C T A C G T A C T G A G T C G T A C A C G T A C T G A C G T C G A T A G T C A G T C A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:KYTGYMTGTWCCS
---TKCTGTTCCA
 A C T G A G C T A C G T A C T G A G T C G T A C A C G T A C T G A C G T C G A T A G T C A G T C A T C G
A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----KYTGYMTGTWCCS
TTCATTTGCATAT----
 A C G T A C G T A C G T A C G T A C T G A G C T A C G T A C T G A G T C G T A C A C G T A C T G A C G T C G A T A G T C A G T C A T C G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-KYTGYMTGTWCCS
ATTTGCATAT----
 A C G T A C T G A G C T A C G T A C T G A G T C G T A C A C G T A C T G A C G T C G A T A G T C A G T C A T C G
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:KYTGYMTGTWCCS
-TWGTCTGV----
 A C T G A G C T A C G T A C T G A G T C G T A C A C G T A C T G A C G T C G A T A G T C A G T C A T C G
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:KYTGYMTGTWCCS----
--TGCCTGCGYCMCCTT
 A C T G A G C T A C G T A C T G A G T C G T A C A C G T A C T G A C G T C G A T A G T C A G T C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-KYTGYMTGTWCCS
VBSYGTCTGG----
 A C G T A C T G A G C T A C G T A C T G A G T C G T A C A C G T A C T G A C G T C G A T A G T C A G T C A T C G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:KYTGYMTGTWCCS
-CTGTCTGG----
 A C T G A G C T A C G T A C T G A G T C G T A C A C G T A C T G A C G T C G A T A G T C A G T C A T C G
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:KYTGYMTGTWCCS--
----AATGTATCAAT
 A C T G A G C T A C G T A C T G A G T C G T A C A C G T A C T G A C G T C G A T A G T C A G T C A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:KYTGYMTGTWCCS------
---GGGTGTGCCCAAAAGG
 A C T G A G C T A C G T A C T G A G T C G T A C A C G T A C T G A C G T C G A T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G