Information for 18-GCTAACTATACAT (Motif 22)

A C T G A G T C A C G T C G T A C G T A G T A C A C G T C G T A G A C T C G T A A G T C C G T A C G A T
Reverse Opposite:
C G T A A C G T A C T G A C G T C G T A A C G T C G T A A C T G A C G T A C G T C G T A A C T G A G T C
p-value:1e-7
log p-value:-1.739e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 6.3bp
Average Position of motif in Background40.6 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCTAACTATACAT
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A G T A C A C G T C G T A G A C T C G T A A G T C C G T A C G A T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PB0081.1_Tcf1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCTAACTATACAT
ACTTAGTTAACTAAAAA-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A G T A C A C G T C G T A G A C T C G T A A G T C C G T A C G A T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTAACTATACAT
NCTAAGTAAACA-
 A C T G A G T C A C G T C G T A C G T A G T A C A C G T C G T A G A C T C G T A A G T C C G T A C G A T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCTAACTATACAT
---GAATATTCAT
 A C T G A G T C A C G T C G T A C G T A G T A C A C G T C G T A G A C T C G T A A G T C C G T A C G A T
A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCTAACTATACAT
ACTTGCTACCTACACC-
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A G T A C A C G T C G T A G A C T C G T A A G T C C G T A C G A T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCTAACTATACAT
---AAATAAACA-
 A C T G A G T C A C G T C G T A C G T A G T A C A C G T C G T A G A C T C G T A A G T C C G T A C G A T
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTAACTATACAT
NCTAATTA-----
 A C T G A G T C A C G T C G T A C G T A G T A C A C G T C G T A G A C T C G T A A G T C C G T A C G A T
T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCTAACTATACAT---
-ATGAATATTCATGAG
 A C T G A G T C A C G T C G T A C G T A G T A C A C G T C G T A G A C T C G T A A G T C C G T A C G A T A C G T A C G T A C G T
A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCTAACTATACAT
--AAAGTAAACA-
 A C T G A G T C A C G T C G T A C G T A G T A C A C G T C G T A G A C T C G T A A G T C C G T A C G A T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCTAACTATACAT
--AAAGTAAACA-
 A C T G A G T C A C G T C G T A C G T A G T A C A C G T C G T A G A C T C G T A A G T C C G T A C G A T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T