Information for 8-GACTATSAKA (Motif 21)

A T C G C G T A G A T C A C G T C G T A C G A T A T G C G T C A A C G T C G T A
Reverse Opposite:
A C G T T G C A A C G T T A C G C G T A A C G T C G T A C T A G G C A T A T G C
p-value:1e-7
log p-value:-1.753e+01
Information Content per bp:1.770
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif95.3
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets58.3 +/- 28.8bp
Average Position of motif in Background48.5 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GACTATSAKA---
TAAGATTATAATACGG
 A C G T A C G T A C G T A T C G C G T A G A T C A C G T C G T A C G A T A T G C G T C A A C G T C G T A A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GACTATSAKA------
NANTATTATAATTNNN
 A T C G C G T A G A T C A C G T C G T A C G A T A T G C G T C A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0105.1_Arid3a_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GACTATSAKA---
ACCCGTATCAAATTT
 A C G T A C G T A T C G C G T A G A T C A C G T C G T A C G A T A T G C G T C A A C G T C G T A A C G T A C G T A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GACTATSAKA---
AATAGGGTATCATATAT
 A C G T A C G T A C G T A C G T A T C G C G T A G A T C A C G T C G T A C G A T A T G C G T C A A C G T C G T A A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0161.1_Six1/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GACTATSAKA---
GATGGGGTATCATTTTT
 A C G T A C G T A C G T A C G T A T C G C G T A G A T C A C G T C G T A C G A T A T G C G T C A A C G T C G T A A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PH0166.1_Six6_2/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GACTATSAKA---
AATAGGGTATCAATATT
 A C G T A C G T A C G T A C G T A T C G C G T A G A T C A C G T C G T A C G A T A T G C G T C A A C G T C G T A A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GACTATSAKA
GACAATGNN-
 A T C G C G T A G A T C A C G T C G T A C G A T A T G C G T C A A C G T C G T A
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GACTATSAKA
CGGATTAN----
 A C G T A C G T A T C G C G T A G A T C A C G T C G T A C G A T A T G C G T C A A C G T C G T A
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GACTATSAKA
----ATTAAA
 A T C G C G T A G A T C A C G T C G T A C G A T A T G C G T C A A C G T C G T A
A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

PB0187.1_Tcf7_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GACTATSAKA-----
CCGTATTATAAACAA
 A T C G C G T A G A T C A C G T C G T A C G A T A T G C G T C A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A