Information for 23-AAGAGACACTGAC (Motif 29)

G T C A C T G A A T C G C G T A T C A G T C G A A T G C G C T A G T A C G C A T T A C G G C T A T G A C
Reverse Opposite:
A C T G C G A T A T G C C G T A C A T G C A G T A T C G A G C T A G T C G A C T A T G C A G C T A C G T
p-value:1e-5
log p-value:-1.195e+01
Information Content per bp:1.653
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif253.8
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets48.6 +/- 27.5bp
Average Position of motif in Background49.3 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAGAGACACTGAC
--AAAACAATGG-
 G T C A C T G A A T C G C G T A T C A G T C G A A T G C G C T A G T A C G C A T T A C G G C T A T G A C
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AAGAGACACTGAC
----GACAATGNN
 G T C A C T G A A T C G C G T A T C A G T C G A A T G C G C T A G T A C G C A T T A C G G C T A T G A C
A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAGAGACACTGAC--
-NAGGTCANTGACCT
 G T C A C T G A A T C G C G T A T C A G T C G A A T G C G C T A G T A C G C A T T A C G G C T A T G A C A C G T A C G T
A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAGAGACACTGAC
AGAAAGTGAAAGTGA-
 A C G T A C G T A C G T G T C A C T G A A T C G C G T A T C A G T C G A A T G C G C T A G T A C G C A T T A C G G C T A T G A C
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AAGAGACACTGAC
-----ACAAAG--
 G T C A C T G A A T C G C G T A T C A G T C G A A T G C G C T A G T A C G C A T T A C G G C T A T G A C
A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AAGAGACACTGAC
GGAAANTGAAACTNA-
 A C G T A C G T A C G T G T C A C T G A A T C G C G T A T C A G T C G A A T G C G C T A G T A C G C A T T A C G G C T A T G A C
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAGAGACACTGAC
---RAACAATGGN
 G T C A C T G A A T C G C G T A T C A G T C G A A T G C G C T A G T A C G C A T T A C G G C T A T G A C
A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGAGACACTGAC
-AGAGGAAGTG--
 G T C A C T G A A T C G C G T A T C A G T C G A A T G C G C T A G T A C G C A T T A C G G C T A T G A C
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGACACTGAC
GAAAGTGAAAGT---
 A C G T A C G T G T C A C T G A A T C G C G T A T C A G T C G A A T G C G C T A G T A C G C A T T A C G G C T A T G A C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAGAGACACTGAC----
-TGACCCAGTGACCTAC
 G T C A C T G A A T C G C G T A T C A G T C G A A T G C G C T A G T A C G C A T T A C G G C T A T G A C A C G T A C G T A C G T A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C