p-value: | 1e-11 |
log p-value: | -2.681e+01 |
Information Content per bp: | 1.847 |
Number of Target Sequences with motif | 20.0 |
Percentage of Target Sequences with motif | 2.90% |
Number of Background Sequences with motif | 171.8 |
Percentage of Background Sequences with motif | 0.36% |
Average Position of motif in Targets | 47.3 +/- 30.6bp |
Average Position of motif in Background | 49.1 +/- 30.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.92 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CACAGCAGGG-- CACAGCAGGGGG |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 2 |
Score: | 0.85 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAGCAGGG---- DCHCAGCAGGRGGCC |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 3 |
Score: | 0.84 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACAGCAGGG-- CCACACAGCAGGAGA |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 4 |
Score: | 0.83 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACAGCAGGG-- GAGCACAGCAGGACA |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 5 |
Score: | 0.82 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACAGCAGGG-- CCACACAGCAGGAGA |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 6 |
Score: | 0.81 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAGCAGGG DCTCAGCAGG- |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 7 |
Score: | 0.76 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACAGCAGGG---- CACAGCGGGGGGTC |
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ZIC3/MA0697.1/Jaspar
Match Rank: | 8 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAGCAGGG---- NCGCAGCGGGGGGTC |
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ZIC4/MA0751.1/Jaspar
Match Rank: | 9 |
Score: | 0.70 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAGCAGGG---- NCNCAGCGGGGGGTC |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 10 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACAGCAGGG CACAGN---- |
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