Homer de novo Motif Results (hs_ColonAdenocarcinoma_LoVo_cancer_HIC2_SRX359837_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 9
Total background sequences = 83722
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * G T C A C G A T G T C A C G T A C T G A A G T C A C T G T G C A C G A T A C G T A C G T C A G T A C T G A G T C G T A C A C G T 1e-9-2.245e+0144.44%0.11%22.1bp (35.9bp)PH0036.1_Gsx2/Jaspar(0.576)
More Information | Similar Motifs Found
motif file (matrix)
2 * C A T G T G A C C G T A A C T G C G T A C T A G G T C A C G T A C G T A A T C G C A G T A C T G C T G A A C T G G A C T C G T A 1e-8-1.939e+0133.33%0.04%30.0bp (51.0bp)PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer(0.636)
More Information | Similar Motifs Found
motif file (matrix)
3 * C G T A A C G T G T C A G T C A C G T A C T G A C G T A C G T A A C T G G A C T C G T A C G T A A C G T A C T G G T C A C G A T 1e-8-1.910e+0122.22%0.00%6.0bp (0.0bp)PH0108.1_Msx3/Jaspar(0.557)
More Information | Similar Motifs Found
motif file (matrix)
4 * C A T G C G T A C G T A A C G T A C T G C G T A C G A T T C G A C G A T G T C A A C T G A T G C C G T A 1e-7-1.746e+0144.44%0.38%26.6bp (37.0bp)LMX1B/MA0703.1/Jaspar(0.699)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C G T C G A T A G T C C G T A A C T G C G A T C G A T A G T C G C A T A C G T G T A C A G T C A C G T A G T C G T A C A C G T 1e-7-1.689e+0133.33%0.08%19.6bp (42.6bp)ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer(0.557)
More Information | Similar Motifs Found
motif file (matrix)
6 * C G A T A C T G C T G A A T G C C G T A A G C T G C T A A G T C C G A T C T A G C T G A T C G A C T A G 1e-7-1.647e+0155.56%1.43%33.3bp (40.4bp)Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer(0.582)
More Information | Similar Motifs Found
motif file (matrix)
7 * C G T A G T C A G T A C C G A T G C T A C G T A T G C A T A C G A C G T G A C T G A T C G T C A G T A C C G T A G A C T C T G A 1e-6-1.453e+0133.33%0.18%25.7bp (30.8bp)USF2/MA0526.1/Jaspar(0.539)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T A T G C C G A T A T C G C G A T A T C G C A T G C A G T C G T A C A T G A G C T G C T A A G T C G A T C G A T C C G A T 1e-6-1.425e+0133.33%0.20%8.2bp (37.0bp)RUNX1/MA0002.2/Jaspar(0.550)
More Information | Similar Motifs Found
motif file (matrix)
9 * G T C A C G T A C T A G A C T G C T A G A C T G C G A T G T C A C G T A C G T A C T G A C T A G C T G A 1e-5-1.282e+0155.56%2.99%19.5bp (39.3bp)Hnf4a/MA0114.3/Jaspar(0.612)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G A T C G T A C G T A C G T A C T G A C G A T A T C G A C G T A C T G G A C T C G A T G T A C A C G T 1e-5-1.180e+0133.33%0.45%24.1bp (38.9bp)PB0146.1_Mafk_2/Jaspar(0.622)
More Information | Similar Motifs Found
motif file (matrix)
11 * A G C T C T G A G C T A G C A T C G T A T A C G G T A C C G T A A G T C A G C T C G T A G C A T C G T A G A C T G A T C G A T C 1e-4-9.718e+0033.33%0.91%9.9bp (35.3bp)PB0194.1_Zbtb12_2/Jaspar(0.587)
More Information | Similar Motifs Found
motif file (matrix)
12 * G C A T C A G T A T G C C G T A A C T G T A C G C G T A A G T C T C A G A C G T A G C T A G T C A G C T 1e-4-9.481e+0022.22%0.15%3.5bp (34.1bp)PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer(0.708)
More Information | Similar Motifs Found
motif file (matrix)
13 * A G T C A C G T A G T C C G T A A C T G A G T C A C T G C G T A C G T A A C G T 1e-3-9.144e+0011.11%0.00%0.0bp (0.0bp)NRL/MA0842.1/Jaspar(0.684)
More Information | Similar Motifs Found
motif file (matrix)
14 * C G T A A C T G A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C T G 1e-3-9.144e+0011.11%0.00%0.0bp (0.0bp)HIC2/MA0738.1/Jaspar(0.681)
More Information | Similar Motifs Found
motif file (matrix)
15 * C G T A C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C T G A G T C 1e-3-9.144e+0011.11%0.00%0.0bp (22.2bp)INSM1/MA0155.1/Jaspar(0.641)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C G T A C G T C G T A C G T A A C T G A C T G A C T G C G T A A G T C A G T C 1e-3-9.144e+0011.11%0.00%0.0bp (23.5bp)PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer(0.636)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A A G T C A C G T A C G T A C G T A G T C A C T G A C G T A C G T A G T C 1e-3-9.144e+0011.11%0.00%0.0bp (0.0bp)T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer(0.810)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G T C C G T A C G T A C G T A A C G T A G T C A G T C A C T G A C G T A C G T 1e-3-9.144e+0011.11%0.00%0.0bp (0.0bp)PB0046.1_Mybl1_1/Jaspar(0.665)
More Information | Similar Motifs Found
motif file (matrix)
19 * C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C G T C G T A 1e-3-9.144e+0011.11%0.00%0.0bp (0.0bp)FOS::JUN/MA0099.2/Jaspar(0.569)
More Information | Similar Motifs Found
motif file (matrix)
20 * A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A 1e-3-9.144e+0011.11%0.00%0.0bp (0.0bp)Gata1/MA0035.3/Jaspar(0.582)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C T G A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A C G T A A G T C 1e-3-9.144e+0011.11%0.00%0.0bp (0.0bp)PB0129.1_Glis2_2/Jaspar(0.769)
More Information | Similar Motifs Found
motif file (matrix)
22 * A G T C C G T A A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C 1e-3-9.144e+0011.11%0.00%0.0bp (0.0bp)POL012.1_TATA-Box/Jaspar(0.576)
More Information | Similar Motifs Found
motif file (matrix)
23 * A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C G T A G T C A G T C C G T A A C G T 1e-3-9.144e+0011.11%0.00%0.0bp (0.0bp)TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer(0.651)
More Information | Similar Motifs Found
motif file (matrix)
24 * C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G 1e-3-9.144e+0011.11%0.00%0.0bp (0.0bp)PH0044.1_Homez/Jaspar(0.673)
More Information | Similar Motifs Found
motif file (matrix)
25 * A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A 1e-3-9.144e+0011.11%0.00%0.0bp (0.0bp)ONECUT3/MA0757.1/Jaspar(0.781)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C T G A C G T C G T A A C T G C G T A A C G T A C T G A C G T A C T G C G T A A C T G A C T G C G T A 1e-3-9.144e+0011.11%0.00%0.0bp (0.0bp)TBX20/MA0689.1/Jaspar(0.649)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C G T A C T G A C G T C G T A A C T G A G T C A C G T A C G T A C T G A C G T C G T A A C T G A G T C 1e-3-9.144e+0011.11%0.00%0.0bp (0.0bp)PB0154.1_Osr1_2/Jaspar(0.580)
More Information | Similar Motifs Found
motif file (matrix)
28 * C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A C G T A 1e-3-9.144e+0011.11%0.00%0.0bp (0.0bp)SMAD3/MA0795.1/Jaspar(0.620)
More Information | Similar Motifs Found
motif file (matrix)
29 * G C T A G A T C G T C A G A T C G A C T C G T A C G A T C G T A G T A C G C T A C T G A C G A T C G T A C G A T C A G T C G T A 1e-3-9.008e+0022.22%0.19%36.1bp (33.9bp)Arid5a/MA0602.1/Jaspar(0.610)
More Information | Similar Motifs Found
motif file (matrix)
30 * A C G T A C T G A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C T G 1e-3-8.451e+0011.11%0.00%0.0bp (15.4bp)PB0164.1_Smad3_2/Jaspar(0.669)
More Information | Similar Motifs Found
motif file (matrix)
31 * C G T A A G T C C G T A A G T C C G T A A C T G C G T A A C T G C G T A C G T A A G T C C G T A A C T G 1e-3-8.451e+0011.11%0.00%0.0bp (0.0bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.603)
More Information | Similar Motifs Found
motif file (matrix)
32 * A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T C G T A 1e-3-8.451e+0011.11%0.00%0.0bp (2.0bp)PH0078.1_Hoxd13/Jaspar(0.629)
More Information | Similar Motifs Found
motif file (matrix)
33 * A C T G A C T G A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T 1e-3-8.045e+0011.11%0.00%0.0bp (28.5bp)FOXD1/MA0031.1/Jaspar(0.682)
More Information | Similar Motifs Found
motif file (matrix)
34 * A C T G A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A C G T A 1e-3-8.045e+0011.11%0.00%0.0bp (0.0bp)THAP1/MA0597.1/Jaspar(0.731)
More Information | Similar Motifs Found
motif file (matrix)
35 * C G T A A G T C C G T A A G T C A C G T C G T A A G T C A G T C C G T A A G T C 1e-3-7.758e+0011.11%0.01%0.0bp (16.5bp)ZBTB7C/MA0695.1/Jaspar(0.639)
More Information | Similar Motifs Found
motif file (matrix)
36 * A G T C C G T A C G T A A C G T A C T G A G T C A C G T A G T C C G T A C G T A 1e-3-7.758e+0011.11%0.01%0.0bp (28.4bp)PB0099.1_Zfp691_1/Jaspar(0.716)
More Information | Similar Motifs Found
motif file (matrix)
37 * A C T G A C G T C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C T G 1e-3-7.535e+0011.11%0.01%0.0bp (29.3bp)NFIL3/MA0025.1/Jaspar(0.729)
More Information | Similar Motifs Found
motif file (matrix)
38 * A C T G A C T G A C G T C G T A A C G T C G T A C G T A A C T G A C T G A C T G 1e-3-7.352e+0011.11%0.01%0.0bp (27.3bp)PB0128.1_Gcm1_2/Jaspar(0.674)
More Information | Similar Motifs Found
motif file (matrix)
39 * C G T A C G T A A C T G A C T G A C T G C G T A A C T G A C G T C G T A A G T C 1e-3-7.198e+0011.11%0.01%0.0bp (29.1bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.735)
More Information | Similar Motifs Found
motif file (matrix)
40 * C G A T A C G T C G A T A G C T A G C T G T C A C G A T C G A T A C G T G A C T C G T A A C G T A C G T A G C T A C G T C G A T 1e-2-5.813e+0011.11%0.03%0.0bp (45.0bp)PB0123.1_Foxl1_2/Jaspar(0.655)
More Information | Similar Motifs Found
motif file (matrix)