Information for 25-TTTAAGTTTTATA (Motif 32)

A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T C G T A C G T A C G T A
p-value:1e-3
log p-value:-8.451e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 0.0bp
Average Position of motif in Background13.9 +/- 2.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTTAAGTTTTATA-----
--NNANTTTTATTGGNNN
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTTAAGTTTTATA-----
-NTNAATTTTATTGNATT
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TTTAAGTTTTATA---
------TTTTATTRGN
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTTAAGTTTTATA--
-----NTTTTATTGG
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTAAGTTTTATA
AGTTTCAKTTTC---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T C G T A
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTTAAGTTTTATA--
-----NTTTTATTGG
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTTAAGTTTTATA---
----DGWTTTATGRCN
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

PH0056.1_Hoxa9/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTTAAGTTTTATA-----
-ANTAATTTTATGGCCGN
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAGTTTTATA
ACTTTCACTTTC---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T C G T A
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TTTAAGTTTTATA---
------TTTTATKRGG
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G