Information for 7-TDCAGVABGTTCT (Motif 12)

G C A T C A G T A T G C C G T A A C T G T A C G C G T A A G T C T C A G A C G T A G C T A G T C A G C T
Reverse Opposite:
C T G A A C T G C T G A C G T A A G T C T A C G C G A T A G T C A G T C C G A T A T C G G C T A C G T A
p-value:1e-4
log p-value:-9.481e+00
Information Content per bp:1.708
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif22.22%
Number of Background Sequences with motif124.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets28.5 +/- 3.5bp
Average Position of motif in Background49.4 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TDCAGVABGTTCT-
GVACAGNMTGTYCTB
 A C G T G C A T C A G T A T G C C G T A A C T G T A C G C G T A A G T C T C A G A C G T A G C T A G T C A G C T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TDCAGVABGTTCT-
GRACAGWMTGTYCTB
 A C G T G C A T C A G T A T G C C G T A A C T G T A C G C G T A A G T C T C A G A C G T A G C T A G T C A G C T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TDCAGVABGTTCT-
GAACADWATGTTCTT
 A C G T G C A T C A G T A T G C C G T A A C T G T A C G C G T A A G T C T C A G A C G T A G C T A G T C A G C T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TDCAGVABGTTCT-
TTCTAGAABNTTCTA
 A C G T G C A T C A G T A T G C C G T A A C T G T A C G C G T A A G T C T C A G A C G T A G C T A G T C A G C T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TDCAGVABGTTCT------
TTCTAGAANNTTCCAGAANN
 A C G T G C A T C A G T A T G C C G T A A C T G T A C G C G T A A G T C T C A G A C G T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HSF4/MA0771.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TDCAGVABGTTCT
TTCTAGAACGTTC-
 A C G T G C A T C A G T A T G C C G T A A C T G T A C G C G T A A G T C T C A G A C G T A G C T A G T C A G C T
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T

HSF1/MA0486.2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TDCAGVABGTTCT
TTCTAGAACGTTC-
 A C G T G C A T C A G T A T G C C G T A A C T G T A C G C G T A A G T C T C A G A C G T A G C T A G T C A G C T
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TDCAGVABGTTCT-
AGNACAGNCTGTTCTN
 A C G T A C G T G C A T C A G T A T G C C G T A A C T G T A C G C G T A A G T C T C A G A C G T A G C T A G T C A G C T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TDCAGVABGTTCT-
AGNACANNNTGTNCTN
 A C G T A C G T G C A T C A G T A T G C C G T A A C T G T A C G C G T A A G T C T C A G A C G T A G C T A G T C A G C T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

HSF2/MA0770.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TDCAGVABGTTCT
TTCTAGAACGTTC-
 A C G T G C A T C A G T A T G C C G T A A C T G T A C G C G T A A G T C T C A G A C G T A G C T A G T C A G C T
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C A C G T