Information for 14-HCAHTATDCHATATTA (Motif 29)

G C T A G A T C G T C A G A T C G A C T C G T A C G A T C G T A G T A C G C T A C T G A C G A T C G T A C G A T C A G T C G T A
Reverse Opposite:
C G A T G T C A C G T A G C A T C G T A A G C T C G A T C A T G G A C T C G T A C G A T C T G A C A T G A C G T C A T G C A G T
p-value:1e-3
log p-value:-9.008e+00
Information Content per bp:1.660
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif22.22%
Number of Background Sequences with motif156.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets58.7 +/- 36.1bp
Average Position of motif in Background48.8 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:HCAHTATDCHATATTA-
---NNTNNCAATATTAG
 G C T A G A T C G T C A G A T C G A C T C G T A C G A T C G T A G T A C G C T A C T G A C G A T C G T A C G A T C A G T C G T A A C G T
A C G T A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:HCAHTATDCHATATTA-
---NNTNNCAATATTAG
 G C T A G A T C G T C A G A T C G A C T C G T A C G A T C G T A G T A C G C T A C T G A C G A T C G T A C G A T C A G T C G T A A C G T
A C G T A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

ZNF410/MA0752.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:HCAHTATDCHATATTA---
--TCCATCCCATAATACTC
 G C T A G A T C G T C A G A T C G A C T C G T A C G A T C G T A G T A C G C T A C T G A C G A T C G T A C G A T C A G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

POU3F3/MA0788.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:HCAHTATDCHATATTA
--ATTATGCTAATTT-
 G C T A G A T C G T C A G A T C G A C T C G T A C G A T C G T A G T A C G C T A C T G A C G A T C G T A C G A T C A G T C G T A
A C G T A C G T C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:HCAHTATDCHATATTA
--AATATGCAAATT--
 G C T A G A T C G T C A G A T C G A C T C G T A C G A T C G T A G T A C G C T A C T G A C G A T C G T A C G A T C A G T C G T A
A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:HCAHTATDCHATATTA
--AATAAACAATN---
 G C T A G A T C G T C A G A T C G A C T C G T A C G A T C G T A G T A C G C T A C T G A C G A T C G T A C G A T C A G T C G T A
A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:HCAHTATDCHATATTA
---GTAAACAAT----
 G C T A G A T C G T C A G A T C G A C T C G T A C G A T C G T A G T A C G C T A C T G A C G A T C G T A C G A T C A G T C G T A
A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:HCAHTATDCHATATTA
----TAATCGATAA--
 G C T A G A T C G T C A G A T C G A C T C G T A C G A T C G T A G T A C G C T A C T G A C G A T C G T A C G A T C A G T C G T A
A C G T A C G T A C G T A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.52
Offset:8
Orientation:forward strand
Alignment:HCAHTATDCHATATTA--
--------CCATATATGG
 G C T A G A T C G T C A G A T C G A C T C G T A C G A T C G T A G T A C G C T A C T G A C G A T C G T A C G A T C A G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

ONECUT1/MA0679.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:HCAHTATDCHATATTA
-AAAAAATCGATAAT-
 G C T A G A T C G T C A G A T C G A C T C G T A C G A T C G T A G T A C G C T A C T G A C G A T C G T A C G A T C A G T C G T A
A C G T T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T A C G T