Information for 13-AAAGGTTTGTCTAGAA (Motif 28)

C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T C G T A A C T G C G T A A G T C C G T A C G T A C G T A A G T C A G T C A C G T A C G T A C G T
p-value:1e-3
log p-value:-9.144e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:AAAGGTTTGTCTAGAA-
-------TGTCTAGACG
 C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

PB0090.1_Zbtb12_1/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AAAGGTTTGTCTAGAA------
-----NNGATCTAGAACCTNNN
 C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

Stat6/MA0520.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AAAGGTTTGTCTAGAA---
----ANTTCTCAGGAANNN
 C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AAAGGTTTGTCTAGAA
------TWGTCTGV--
 C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AAAGGTTTGTCTAGAA-----
------NGNTCTAGAACCNGV
 C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTTTGTCTAGAA
CAAAGGCGTGGCCAG--
 A C G T C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A C G T A
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAAGGTTTGTCTAGAA-
-NNNNTTTGTTTACNNT
 C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A C G T A A C G T
A C G T G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AAAGGTTTGTCTAGAA
-TAGAANVTTCTAGAA
 C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A C G T A
A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AAAGGTTTGTCTAGAA--
------TTCTNNAGAANT
 C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

Foxk1/MA0852.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AAAGGTTTGTCTAGAA---
--NNNTTTGTTTACATTTN
 C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T