Information for 11-GCGGGCAGAA (Motif 34)

A C T G A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T A C T G A G T C A G T C A G T C A C T G A G T C
p-value:1e-3
log p-value:-8.045e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGCAGAA
TNNGGGCAG--
 A C G T A C T G A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGCAGAA
NGTGGGCAT--
 A C G T A C T G A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCGGGCAGAA
GGGCGGGAAGG-
 A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A C G T A
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCGGGCAGAA
CWGGCGGGAA---
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A C G T A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCGGGCAGAA
GGGCGGGAAGG-
 A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A C G T A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCGGGCAGAA
TATGCGGGTA---
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A C G T A
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCGGGCAGAA
GGCGGGAAAH-
 A C G T A C T G A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A C G T A
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCGGGCAGAA
GGCGGGAARN-
 A C G T A C T G A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A C G T A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCGGGCAGAA
BTKGGCGGGAAA--
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A C G T A
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------GCGGGCAGAA
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C C G T A A C T G C G T A C G T A
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A