Information for 2-KMAGARMAASKKRKYW (Motif 2)

C A T G T G A C C G T A A C T G C G T A C T A G G T C A C G T A C G T A A T C G C A G T A C T G C T G A A C T G G A C T C G T A
Reverse Opposite:
C G A T C T G A G T A C A G C T T G A C G T A C A T G C A C G T A C G T C A G T A G T C A C G T A G T C A C G T A C T G G T A C
p-value:1e-8
log p-value:-1.939e+01
Information Content per bp:1.725
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif30.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets67.3 +/- 30.0bp
Average Position of motif in Background57.1 +/- 51.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-KMAGARMAASKKRKYW
GAAAGTGAAAGT-----
 A C G T C A T G T G A C C G T A A C T G C G T A C T A G G T C A C G T A C G T A A T C G C A G T A C T G C T G A A C T G G A C T C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--KMAGARMAASKKRKYW
AGAAAGTGAAAGTGA---
 A C G T A C G T C A T G T G A C C G T A A C T G C G T A C T A G G T C A C G T A C G T A A T C G C A G T A C T G C T G A A C T G G A C T C G T A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:KMAGARMAASKKRKYW
--AGAGGAAGTG----
 C A T G T G A C C G T A A C T G C G T A C T A G G T C A C G T A C G T A A T C G C A G T A C T G C T G A A C T G G A C T C G T A
A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-KMAGARMAASKKRKYW
ATAAGAACAAAGGACTA
 A C G T C A T G T G A C C G T A A C T G C G T A C T A G G T C A C G T A C G T A A T C G C A G T A C T G C T G A A C T G G A C T C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--KMAGARMAASKKRKYW
AAACAGACAAAGGAAT--
 A C G T A C G T C A T G T G A C C G T A A C T G C G T A C T A G G T C A C G T A C G T A A T C G C A G T A C T G C T G A A C T G G A C T C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-KMAGARMAASKKRKYW
AGAAGAACAAAGGACTA
 A C G T C A T G T G A C C G T A A C T G C G T A C T A G G T C A C G T A C G T A A T C G C A G T A C T G C T G A A C T G G A C T C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

LEF1/MA0768.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:KMAGARMAASKKRKYW
AAAGATCAAAGGGTT-
 C A T G T G A C C G T A A C T G C G T A C T A G G T C A C G T A C G T A A T C G C A G T A C T G C T G A A C T G G A C T C G T A
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-KMAGARMAASKKRKYW
TTAAGAACAATAAATT-
 A C G T C A T G T G A C C G T A A C T G C G T A C T A G G T C A C G T A C G T A A T C G C A G T A C T G C T G A A C T G G A C T C G T A
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-KMAGARMAASKKRKYW
GGAAGTGAAAST-----
 A C G T C A T G T G A C C G T A A C T G C G T A C T A G G T C A C G T A C G T A A T C G C A G T A C T G C T G A A C T G G A C T C G T A
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:KMAGARMAASKKRKYW
AAAGRGGAAGTG----
 C A T G T G A C C G T A A C T G C G T A C T A G G T C A C G T A C G T A A T C G C A G T A C T G C T G A A C T G G A C T C G T A
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T A C G T A C G T