Information for 14-CATCTAAAAACCC (Motif 22)

A G T C C G T A A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G
p-value:1e-3
log p-value:-9.144e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATCTAAAAACCC---
-GTATAAAAGGCGGGG
 A G T C C G T A A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C G T A C G T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CATCTAAAAACCC---
-GTATAAAAGGCGGGG
 A G T C C G T A A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C G T A C G T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CATCTAAAAACCC--
NNGATCTAGAACCTNNN
 A C G T A C G T A G T C C G T A A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CATCTAAAAACCC
TCACCCATCAATAAACA-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CATCTAAAAACCC
WWATRTAAACAN--
 A C G T A G T C C G T A A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CATCTAAAAACCC
CCYMATAAAA----
 A C G T A G T C C G T A A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CATCTAAAAACCC
-AAATAAACA---
 A G T C C G T A A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------CATCTAAAAACCC
AATATACATGTAAAACA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CATCTAAAAACCC
-ATGTAAACADGS
 A G T C C G T A A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C
A C G T C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CATCTAAAAACCC
AACCCAATAAAATTCG
 A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G