Information for 7-TCTSWGGTNGTACCCT (Motif 8)

A C G T A T G C C G A T A T C G C G A T A T C G C A T G C A G T C G T A C A T G A G C T G C T A A G T C G A T C G A T C C G A T
Reverse Opposite:
C G T A C T A G C A T G T C A G C G A T C T G A G A T C A C G T G C T A G T A C A T G C C G T A A T G C C G T A A T C G C G T A
p-value:1e-6
log p-value:-1.425e+01
Information Content per bp:1.617
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif167.6
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets44.3 +/- 8.2bp
Average Position of motif in Background44.3 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCTSWGGTNGTACCCT
GTCTGTGGTTT------
 A C G T A C G T A T G C C G A T A T C G C G A T A T C G C A T G C A G T C G T A C A T G A G C T G C T A A G T C G A T C G A T C C G A T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCTSWGGTNGTACCCT
NNHTGTGGTTWN-----
 A C G T A C G T A T G C C G A T A T C G C G A T A T C G C A T G C A G T C G T A C A T G A G C T G C T A A G T C G A T C G A T C C G A T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCTSWGGTNGTACCCT
GCTGTGGTTT------
 A C G T A T G C C G A T A T C G C G A T A T C G C A T G C A G T C G T A C A T G A G C T G C T A A G T C G A T C G A T C C G A T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:4
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TCTSWGGTNGTACCCT
ANTTCTCAGGAANNN----
 A C G T A C G T A C G T A C G T A T G C C G A T A T C G C G A T A T C G C A T G C A G T C G T A C A T G A G C T G C T A A G T C G A T C G A T C C G A T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----TCTSWGGTNGTACCCT
AGTATTCTCGGTTGC------
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G A T A T C G C G A T A T C G C A T G C A G T C G T A C A T G A G C T G C T A A G T C G A T C G A T C C G A T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---TCTSWGGTNGTACCCT
AAATCACTGC---------
 A C G T A C G T A C G T A C G T A T G C C G A T A T C G C G A T A T C G C A T G C A G T C G T A C A T G A G C T G C T A A G T C G A T C G A T C C G A T
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TCTSWGGTNGTACCCT
TTCTNMGGAA-------
 A C G T A C G T A T G C C G A T A T C G C G A T A T C G C A T G C A G T C G T A C A T G A G C T G C T A A G T C G A T C G A T C C G A T
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----TCTSWGGTNGTACCCT
NNTNNTGTCTGGNNTNG----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G A T A T C G C G A T A T C G C A T G C A G T C G T A C A T G A G C T G C T A A G T C G A T C G A T C C G A T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TCTSWGGTNGTACCCT
NNTGTGGTTT------
 A C G T A T G C C G A T A T C G C G A T A T C G C A T G C A G T C G T A C A T G A G C T G C T A A G T C G A T C G A T C C G A T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:TCTSWGGTNGTACCCT
-CTGTGGTTTN-----
 A C G T A T G C C G A T A T C G C G A T A T C G C A T G C A G T C G T A C A T G A G C T G C T A A G T C G A T C G A T C C G A T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T