Homer de novo Motif Results (hs_Embryonic_HUES64_normal_SMAD4_SRX702098_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 938
Total background sequences = 47794
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A T C G A T G C A T C G A G T C T A G C G T A C A G T C A G T C A C G T A C T G T A C G G A C T A C T G 1e-19-4.391e+013.62%0.45%23.7bp (26.7bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.884)
More Information | Similar Motifs Found		motif file (matrix)
2 C T G A A G T C A T C G C G T A C T G A C G T A A G T C G T C A A G T C A C T G 1e-14-3.311e+011.92%0.14%32.8bp (26.0bp)E-box(bHLH)/Promoter/Homer(0.663)
More Information | Similar Motifs Found		motif file (matrix)
3 A G T C C G A T A C G T A G C T T C A G A C G T A G C T G T C A C G A T A C G T A G T C G C T A T C G A 1e-13-3.053e+011.92%0.16%31.2bp (30.5bp)PB0061.1_Sox11_1/Jaspar(0.792)
More Information | Similar Motifs Found		motif file (matrix)
4 A G T C A C G T A C T G T G C A T G A C A T G C G T C A T A G C T C G A C T G A A C T G T G A C C T A G A C T G A T C G G T A C 1e-13-3.020e+010.64%0.00%20.4bp (0.0bp)CTCF/MA0139.1/Jaspar(0.724)
More Information | Similar Motifs Found		motif file (matrix)
5 A C T G T A C G A T G C C G A T T A G C C G T A A G C T A C G T A G T C G T A C G T C A T A C G T A C G A T G C A G T C C G T A 1e-13-3.020e+010.64%0.00%24.5bp (0.0bp)TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer(0.710)
More Information | Similar Motifs Found		motif file (matrix)
6 A C G T A C T G A T G C G C A T A C T G T A G C A G T C G A T C A G C T A G T C C G A T T A C G T A G C A C G T A C T G A T C G 1e-13-3.020e+010.64%0.00%15.5bp (9.2bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.759)
More Information | Similar Motifs Found		motif file (matrix)
7 T G A C A T G C A C G T T A G C G T A C T C A G A T C G A T G C T A G C A T G C T A G C A T C G A T G C A T G C A G C T A T G C 1e-12-2.868e+014.69%1.26%25.0bp (28.9bp)Sp1(Zf)/Promoter/Homer(0.772)
More Information | Similar Motifs Found		motif file (matrix)
8 A G T C A T G C G T C A G C A T A C G T A G T C C G T A A C T G C T G A C T A G A C T G G T A C C G T A 1e-12-2.843e+010.75%0.01%22.6bp (19.7bp)NFYA/MA0060.2/Jaspar(0.613)
More Information | Similar Motifs Found		motif file (matrix)
9 * A C G T A C T G C T A G A T G C A C T G A T G C A C G T A C T G A T G C A C T G A T C G G T C A A T C G 1e-11-2.649e+012.88%0.53%25.3bp (27.7bp)Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer(0.636)
More Information | Similar Motifs Found		motif file (matrix)
10 * A G T C A C G T A C G T A C T G A C G T A G T C A G T C A G T C C G A T A T G C A C G T A C G T A G T C 1e-11-2.606e+010.64%0.01%26.6bp (23.7bp)PB0200.1_Zfp187_2/Jaspar(0.650)
More Information | Similar Motifs Found		motif file (matrix)
11 * C T G A A T C G T A C G A T C G G C T A A T G C G T A C A T C G T A C G T A G C A C T G T A G C A T C G 1e-11-2.583e+012.56%0.42%21.6bp (29.7bp)POL006.1_BREu/Jaspar(0.613)
More Information | Similar Motifs Found		motif file (matrix)
12 * T A G C A C T G C G A T G T C A T C G A C G T A A G T C C G T A C T G A T C A G 1e-10-2.515e+011.92%0.22%26.4bp (33.2bp)FOXO3/MA0157.2/Jaspar(0.860)
More Information | Similar Motifs Found		motif file (matrix)
13 * A C T G A C T G A C T G C G A T C T G A G T A C A C T G A C T G A G T C A G T C C G T A A C T G A G T C 1e-10-2.447e+010.53%0.00%37.3bp (9.7bp)EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer(0.602)
More Information | Similar Motifs Found		motif file (matrix)
14 * A G T C A G T C A C G T C T G A A T C G A T G C A C G T A G T C A T G C C T A G A C T G A C T G A C T G A G T C A C G T A C T G 1e-10-2.447e+010.53%0.00%27.9bp (4.3bp)POL013.1_MED-1/Jaspar(0.570)
More Information | Similar Motifs Found		motif file (matrix)
15 * A T G C A G T C A G T C G T A C A C T G A G T C A G T C A G C T A C T G T G A C A C G T A G T C A G T C A G T C A T G C A C G T 1e-10-2.447e+010.53%0.00%16.8bp (0.0bp)SP2/MA0516.1/Jaspar(0.658)
More Information | Similar Motifs Found		motif file (matrix)
16 * C G A T A G T C A C T G A T G C A C T G A C T G A G T C A T G C A T C G A G T C A C T G C G T A A T C G 1e-10-2.364e+010.64%0.01%10.2bp (40.1bp)NHLH1/MA0048.2/Jaspar(0.558)
More Information | Similar Motifs Found		motif file (matrix)
17 * C G T A A C T G A T G C G T A C C T A G A C T G A G T C C G A T A T C G A C T G A C T G A G T C A C G T 1e-10-2.362e+010.75%0.01%17.1bp (22.9bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.613)
More Information | Similar Motifs Found		motif file (matrix)
18 * T G A C A C T G A C T G A C T G C G T A A C G T A G T C A G T C A G T C A C T G G T A C A G T C A C T G 1e-9-2.241e+010.85%0.03%18.8bp (20.4bp)NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer(0.737)
More Information | Similar Motifs Found		motif file (matrix)
19 * G T C A A C G T A C G T A G T C A G T C A C T G A C T G A T G C A G T C A G T C A G T C A G T C A C G T 1e-9-2.193e+010.64%0.01%23.7bp (20.1bp)Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer(0.656)
More Information | Similar Motifs Found		motif file (matrix)
20 * C G A T A T G C A G T C A C T G A G T C G T C A A G T C A T C G A G T C A G T C C G T A A G T C A C G T A C T G A G T C A C G T 1e-9-2.193e+010.64%0.01%16.7bp (15.2bp)Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer(0.545)
More Information | Similar Motifs Found		motif file (matrix)
21 * C A T G A C T G A G T C A G T C A G T C G T A C A C G T A G T C A G T C A G T C A G T C A G T C T C G A T A G C T A G C A G T C 1e-9-2.187e+011.28%0.10%22.8bp (28.2bp)Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer(0.882)
More Information | Similar Motifs Found		motif file (matrix)
22 * A G T C C A G T A C T G A T C G C T G A C G T A A G T C C G T A C G T A C G A T 1e-9-2.146e+011.17%0.08%24.4bp (28.4bp)PB0072.1_Sox5_1/Jaspar(0.804)
More Information | Similar Motifs Found		motif file (matrix)
23 * A C T G A G T C T A C G A T C G A T G C A G T C A T G C T C G A T G A C T A C G A G T C A T G C A G T C 1e-9-2.078e+011.81%0.26%28.8bp (32.5bp)Klf12/MA0742.1/Jaspar(0.733)
More Information | Similar Motifs Found		motif file (matrix)
24 * A C T G A C T G G T C A A G T C A C T G A G T C A C T G A G T C A G T C A C T G A C G T A G T C A C G T 1e-8-2.061e+010.64%0.01%11.9bp (36.8bp)PB0009.1_E2F3_1/Jaspar(0.637)
More Information | Similar Motifs Found		motif file (matrix)
25 * A C G T T G C A T C G A C A G T C A T G A G C T T A G C C G A T A C T G A C T G 1e-8-1.937e+014.58%1.64%26.7bp (27.2bp)PB0060.1_Smad3_1/Jaspar(0.886)
More Information | Similar Motifs Found		motif file (matrix)
26 * A T G C A C T G A C T G C T A G C T G A A T G C A G T C A G C T A C G T A C G T 1e-8-1.901e+011.81%0.29%19.1bp (31.2bp)PB0053.1_Rara_1/Jaspar(0.728)
More Information | Similar Motifs Found		motif file (matrix)
27 * A C T G A G T C A T C G A C G T C G T A A G T C A G T C A G T C A C T G A C T G A C G T C T A G A C T G C T A G C G T A A G T C 1e-8-1.892e+010.43%0.00%16.7bp (0.0bp)PB0094.1_Zfp128_1/Jaspar(0.549)
More Information | Similar Motifs Found		motif file (matrix)
28 * T A G C G T A C A T C G A G C T A T G C A G C T A T C G A C T G T A G C A G C T T C G A T A C G A G T C 1e-8-1.892e+013.73%1.18%23.0bp (28.9bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.719)
More Information | Similar Motifs Found		motif file (matrix)
29 * A C T G A C G T A T G C T A G C A G T C C T A G A G T C A G T C G T C A A T G C 1e-8-1.887e+012.67%0.65%23.5bp (28.5bp)Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer(0.752)
More Information | Similar Motifs Found		motif file (matrix)
30 * C G T A G T A C A C G T A C G T A T G C A G T C T A C G A T C G A T G C A C G T 1e-8-1.886e+0118.23%11.79%26.0bp (30.5bp)ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer(0.869)
More Information | Similar Motifs Found		motif file (matrix)
31 * A T G C C T G A T A C G A G T C T A C G G C T A G A T C C A T G A T G C G A C T 1e-6-1.452e+015.01%2.24%26.3bp (32.5bp)POL009.1_DCE_S_II/Jaspar(0.606)
More Information | Similar Motifs Found		motif file (matrix)