Information for 4-TGCTGCCCTCTGCTGG (Motif 6)

A C G T A C T G A T G C G C A T A C T G T A G C A G T C G A T C A G C T A G T C C G A T T A C G T A G C A C G T A C T G A T C G
Reverse Opposite:
A T G C A G T C C G T A A T C G A G T C C G T A A C T G T C G A C T A G A C T G A C T G G T A C C G T A A T C G G T A C T C G A
p-value:1e-13
log p-value:-3.020e+01
Information Content per bp:1.778
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.1 +/- 15.5bp
Average Position of motif in Background71.3 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TGCTGCCCTCTGCTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C T G A T G C G C A T A C T G T A G C A G T C G A T C A G C T A G T C C G A T T A C G T A G C A C G T A C T G A T C G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGCTGCCCTCTGCTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C T G A T G C G C A T A C T G T A G C A G T C G A T C A G C T A G T C C G A T T A C G T A G C A C G T A C T G A T C G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TGCTGCCCTCTGCTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C T G A T G C G C A T A C T G T A G C A G T C G A T C A G C T A G T C C G A T T A C G T A G C A C G T A C T G A T C G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGCTGCCCTCTGCTGG
--CTGACCTTTG----
 A C G T A C T G A T G C G C A T A C T G T A G C A G T C G A T C A G C T A G T C C G A T T A C G T A G C A C G T A C T G A T C G
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGCTGCCCTCTGCTGG
----GCCATCTGTT--
 A C G T A C T G A T G C G C A T A C T G T A G C A G T C G A T C A G C T A G T C C G A T T A C G T A G C A C G T A C T G A T C G
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGCTGCCCTCTGCTGG--
---TGWCCTCARNTGACC
 A C G T A C T G A T G C G C A T A C T G T A G C A G T C G A T C A G C T A G T C C G A T T A C G T A G C A C G T A C T G A T C G A C G T A C G T
A C G T A C G T A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGCTGCCCTCTGCTGG
----ACCATCTGTT--
 A C G T A C T G A T G C G C A T A C T G T A G C A G T C G A T C A G C T A G T C C G A T T A C G T A G C A C G T A C T G A T C G
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TGCTGCCCTCTGCTGG
AATTTGCTGAC---------
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C G C A T A C T G T A G C A G T C G A T C A G C T A G T C C G A T T A C G T A G C A C G T A C T G A T C G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TGCTGCCCTCTGCTGG--
---GGCCYCCTGCTGDGH
 A C G T A C T G A T G C G C A T A C T G T A G C A G T C G A T C A G C T A G T C C G A T T A C G T A G C A C G T A C T G A T C G A C G T A C G T
A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TGCTGCCCTCTGCTGG-
-----CCCCCTGCTGTG
 A C G T A C T G A T G C G C A T A C T G T A G C A G T C G A T C A G C T A G T C C G A T T A C G T A G C A C G T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G