p-value: | 1e-8 |
log p-value: | -1.892e+01 |
Information Content per bp: | 1.679 |
Number of Target Sequences with motif | 35.0 |
Percentage of Target Sequences with motif | 3.73% |
Number of Background Sequences with motif | 566.2 |
Percentage of Background Sequences with motif | 1.18% |
Average Position of motif in Targets | 54.4 +/- 23.0bp |
Average Position of motif in Background | 51.5 +/- 28.9bp |
Strand Bias (log2 ratio + to - strand density) | -0.5 |
Multiplicity (# of sites on avg that occur together) | 1.03 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCGYCTGGCTRGC CTGTCTGG----- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.70 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCGYCTGGCTRGC VBSYGTCTGG----- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCGYCTGGCTRGC -GGTCTGGCAT-- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CCGYCTGGCTRGC NNTNNTGTCTGGNNTNG |
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NFIC/MA0161.1/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCGYCTGGCTRGC ----TTGGCA--- |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCGYCTGGCTRGC -WDNCTGGGCA-- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCGYCTGGCTRGC TWGTCTGV----- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCGYCTGGCTRGC ---NTTGGCANN- |
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Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCGYCTGGCTRGC---- --GYCTGGYYTNTGTCA |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCGYCTGGCTRGC----- ----CTGGCAGNCTGCCA |
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