Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-26 | -6.203e+01 | 0.0000 | 51.0 | 5.44% | 349.5 | 0.73% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-21 | -5.036e+01 | 0.0000 | 80.0 | 8.53% | 1113.3 | 2.33% | motif file (matrix) |
svg |
3 |
| Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer | 1e-19 | -4.410e+01 | 0.0000 | 173.0 | 18.44% | 4261.0 | 8.91% | motif file (matrix) |
svg |
4 |
| Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer | 1e-17 | -3.923e+01 | 0.0000 | 165.0 | 17.59% | 4183.4 | 8.75% | motif file (matrix) |
svg |
5 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-7 | -1.809e+01 | 0.0000 | 8.0 | 0.85% | 21.3 | 0.04% | motif file (matrix) |
svg |
6 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-7 | -1.657e+01 | 0.0000 | 69.0 | 7.36% | 1748.5 | 3.66% | motif file (matrix) |
svg |
7 |
| Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer | 1e-5 | -1.346e+01 | 0.0001 | 165.0 | 17.59% | 5861.8 | 12.26% | motif file (matrix) |
svg |
8 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-5 | -1.246e+01 | 0.0002 | 273.0 | 29.10% | 10879.9 | 22.76% | motif file (matrix) |
svg |
9 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-4 | -1.140e+01 | 0.0005 | 39.0 | 4.16% | 924.9 | 1.93% | motif file (matrix) |
svg |
10 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-4 | -1.112e+01 | 0.0005 | 60.0 | 6.40% | 1703.9 | 3.56% | motif file (matrix) |
svg |
11 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.089e+01 | 0.0006 | 87.0 | 9.28% | 2787.4 | 5.83% | motif file (matrix) |
svg |
12 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.780e+00 | 0.0017 | 87.0 | 9.28% | 2877.9 | 6.02% | motif file (matrix) |
svg |
13 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-4 | -9.764e+00 | 0.0017 | 78.0 | 8.32% | 2508.6 | 5.25% | motif file (matrix) |
svg |
14 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -9.563e+00 | 0.0018 | 54.0 | 5.76% | 1568.2 | 3.28% | motif file (matrix) |
svg |
15 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-4 | -9.333e+00 | 0.0021 | 83.0 | 8.85% | 2749.9 | 5.75% | motif file (matrix) |
svg |
16 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-3 | -8.987e+00 | 0.0028 | 6.0 | 0.64% | 38.6 | 0.08% | motif file (matrix) |
svg |
17 |
| E-box(bHLH)/Promoter/Homer | 1e-3 | -8.818e+00 | 0.0032 | 17.0 | 1.81% | 303.5 | 0.63% | motif file (matrix) |
svg |
18 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.375e+00 | 0.0047 | 106.0 | 11.30% | 3818.9 | 7.99% | motif file (matrix) |
svg |
19 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.316e+00 | 0.0047 | 33.0 | 3.52% | 852.8 | 1.78% | motif file (matrix) |
svg |
20 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.291e+00 | 0.0047 | 22.0 | 2.35% | 475.0 | 0.99% | motif file (matrix) |
svg |
21 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-3 | -7.921e+00 | 0.0063 | 13.0 | 1.39% | 211.8 | 0.44% | motif file (matrix) |
svg |
22 |
| GFY(?)/Promoter/Homer | 1e-3 | -7.871e+00 | 0.0063 | 16.0 | 1.71% | 299.4 | 0.63% | motif file (matrix) |
svg |
23 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-3 | -7.563e+00 | 0.0082 | 174.0 | 18.55% | 6978.3 | 14.60% | motif file (matrix) |
svg |
24 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.071e+00 | 0.0129 | 37.0 | 3.94% | 1069.4 | 2.24% | motif file (matrix) |
svg |
25 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-3 | -7.068e+00 | 0.0129 | 24.0 | 2.56% | 590.0 | 1.23% | motif file (matrix) |
svg |
26 |
| ETS(ETS)/Promoter/Homer | 1e-3 | -7.022e+00 | 0.0129 | 48.0 | 5.12% | 1504.2 | 3.15% | motif file (matrix) |
svg |
27 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-3 | -6.985e+00 | 0.0129 | 78.0 | 8.32% | 2755.1 | 5.76% | motif file (matrix) |
svg |
28 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -6.905e+00 | 0.0130 | 44.0 | 4.69% | 1353.7 | 2.83% | motif file (matrix) |
svg |
29 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-2 | -6.838e+00 | 0.0135 | 40.0 | 4.26% | 1200.1 | 2.51% | motif file (matrix) |
svg |
30 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-2 | -6.332e+00 | 0.0216 | 13.0 | 1.39% | 252.1 | 0.53% | motif file (matrix) |
svg |
31 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -6.228e+00 | 0.0232 | 16.0 | 1.71% | 351.7 | 0.74% | motif file (matrix) |
svg |
32 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.196e+00 | 0.0232 | 186.0 | 19.83% | 7760.6 | 16.24% | motif file (matrix) |
svg |
33 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.982e+00 | 0.0278 | 22.0 | 2.35% | 569.2 | 1.19% | motif file (matrix) |
svg |
34 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -5.820e+00 | 0.0318 | 20.0 | 2.13% | 505.3 | 1.06% | motif file (matrix) |
svg |
35 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -5.799e+00 | 0.0318 | 17.0 | 1.81% | 401.9 | 0.84% | motif file (matrix) |
svg |
36 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -5.787e+00 | 0.0318 | 14.0 | 1.49% | 301.5 | 0.63% | motif file (matrix) |
svg |
37 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.502e+00 | 0.0401 | 44.0 | 4.69% | 1461.3 | 3.06% | motif file (matrix) |
svg |
38 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-2 | -5.481e+00 | 0.0401 | 20.0 | 2.13% | 521.3 | 1.09% | motif file (matrix) |
svg |
39 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -5.464e+00 | 0.0401 | 80.0 | 8.53% | 3011.9 | 6.30% | motif file (matrix) |
svg |
40 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-2 | -5.401e+00 | 0.0410 | 30.0 | 3.20% | 904.5 | 1.89% | motif file (matrix) |
svg |
41 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -5.396e+00 | 0.0410 | 14.0 | 1.49% | 315.2 | 0.66% | motif file (matrix) |
svg |
42 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.320e+00 | 0.0424 | 12.0 | 1.28% | 252.5 | 0.53% | motif file (matrix) |
svg |
43 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-2 | -5.108e+00 | 0.0512 | 14.0 | 1.49% | 326.4 | 0.68% | motif file (matrix) |
svg |
44 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-2 | -5.054e+00 | 0.0528 | 12.0 | 1.28% | 261.3 | 0.55% | motif file (matrix) |
svg |
45 |
| CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -5.036e+00 | 0.0528 | 4.0 | 0.43% | 37.3 | 0.08% | motif file (matrix) |
svg |
46 |
| Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -4.998e+00 | 0.0534 | 15.0 | 1.60% | 365.7 | 0.77% | motif file (matrix) |
svg |
47 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.921e+00 | 0.0565 | 10.0 | 1.07% | 201.5 | 0.42% | motif file (matrix) |
svg |
48 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.830e+00 | 0.0606 | 26.0 | 2.77% | 785.8 | 1.64% | motif file (matrix) |
svg |
49 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -4.759e+00 | 0.0637 | 73.0 | 7.78% | 2789.9 | 5.84% | motif file (matrix) |
svg |
50 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-2 | -4.698e+00 | 0.0663 | 13.0 | 1.39% | 308.0 | 0.64% | motif file (matrix) |
svg |
51 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-2 | -4.673e+00 | 0.0667 | 29.0 | 3.09% | 915.7 | 1.92% | motif file (matrix) |
svg |
52 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-2 | -4.611e+00 | 0.0696 | 9.0 | 0.96% | 179.7 | 0.38% | motif file (matrix) |
svg |