Information for 9-GTCCCGCCAC (Motif 29)

A C T G A C G T A T G C T A G C A G T C C T A G A G T C A G T C G T C A A T G C
Reverse Opposite:
A T C G A C G T A C T G C T A G G A T C A C T G A T C G A T C G C G T A A G T C
p-value:1e-8
log p-value:-1.887e+01
Information Content per bp:1.805
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif310.2
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets46.2 +/- 23.5bp
Average Position of motif in Background45.3 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GTCCCGCCAC
CNGTCACGCCAC
 A C G T A C G T A C T G A C G T A T G C T A G C A G T C C T A G A G T C A G T C G T C A A T G C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GTCCCGCCAC----
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C T G A C G T A T G C T A G C A G T C C T A G A G T C A G T C G T C A A T G C A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCGCCAC
GGTCCCGCCC-
 A C G T A C T G A C G T A T G C T A G C A G T C C T A G A G T C A G T C G T C A A T G C
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTCCCGCCAC--
GTGACGTCACCG
 A C T G A C G T A T G C T A G C A G T C C T A G A G T C A G T C G T C A A T G C A C G T A C G T
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTCCCGCCAC
TTCCCGCCWG
 A C T G A C G T A T G C T A G C A G T C C T A G A G T C A G T C G T C A A T G C
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTCCCGCCAC
ATCACCCCAT
 A C T G A C G T A T G C T A G C A G T C C T A G A G T C A G T C G T C A A T G C
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCGCCAC-
TTTCCCGCCMAV
 A C G T A C T G A C G T A T G C T A G C A G T C C T A G A G T C A G T C G T C A A T G C A C G T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTCCCGCCAC-----
GCCCCGCCCCCTCCC
 A C T G A C G T A T G C T A G C A G T C C T A G A G T C A G T C G T C A A T G C A C G T A C G T A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GTCCCGCCAC
VDTTTCCCGCCA-
 A C G T A C G T A C G T A C T G A C G T A T G C T A G C A G T C C T A G A G T C A G T C G T C A A T G C
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCGCCAC
NNTTCCCGCCC-
 A C G T A C G T A C T G A C G T A T G C T A G C A G T C C T A G A G T C A G T C G T C A A T G C
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T