Homer de novo Motif Results (hs_lymphoma_Raji_cancer_CIITA_SRX865413_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 416
Total background sequences = 44179
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G A T C G T A C C G T A C T G A T C A G C T G A A C G T A C T G T A C G A G T C A T C G T A C G G A T C 1e-235-5.413e+0242.79%1.00%24.4bp (38.6bp)YY1/MA0095.2/Jaspar(0.976)
More Information | Similar Motifs Found
motif file (matrix)
2 A G T C C G T A A C G T A G T C A C G T A C G T A C T G A T C G C G T A C G T A A C T G T A C G C T A G A C T G A C T G A G T C 1e-20-4.806e+012.40%0.01%28.8bp (16.6bp)INSM1/MA0155.1/Jaspar(0.655)
More Information | Similar Motifs Found
motif file (matrix)
3 G A C T A C G T C A T G G T A C A T G C G T A C A G C T G A C T T G C A C T G A 1e-16-3.749e+018.41%1.38%23.9bp (30.2bp)THAP1/MA0597.1/Jaspar(0.820)
More Information | Similar Motifs Found
motif file (matrix)
4 G T C A A G C T A C G T C G A T A C T G A G C T A G T C G A C T A G T C A G C T C T A G A C T G G T A C C G T A A C T G G C T A 1e-13-3.048e+011.44%0.01%19.7bp (4.2bp)PB0195.1_Zbtb3_2/Jaspar(0.629)
More Information | Similar Motifs Found
motif file (matrix)
5 A G C T C T G A A T G C A T G C C T A G A G C T G T C A A T G C C G T A C T A G 1e-12-2.975e+014.81%0.51%28.6bp (31.7bp)POL009.1_DCE_S_II/Jaspar(0.676)
More Information | Similar Motifs Found
motif file (matrix)
6 A G C T C G T A C T A G A G T C C T G A A C G T A G T C G T C A A C G T A G T C C G T A A C T G A C G T 1e-12-2.816e+011.20%0.00%10.2bp (19.8bp)ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer(0.615)
More Information | Similar Motifs Found
motif file (matrix)
7 * C G T A C T G A A G T C A G T C A G T C A G T C A C G T C T G A G T A C A C T G A C T G A G T C G T C A 1e-11-2.634e+011.44%0.01%29.8bp (18.1bp)TFAP2B(var.3)/MA0813.1/Jaspar(0.716)
More Information | Similar Motifs Found
motif file (matrix)
8 * G T C A A C T G C T G A C T G A A T C G G T A C G C T A A C T G G A T C A C T G 1e-11-2.581e+013.85%0.36%20.2bp (37.8bp)POL008.1_DCE_S_I/Jaspar(0.689)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C T G A G T C A C T G A C G T A G T C C T G A C G T A A T G C A T G C A G C T 1e-10-2.395e+011.68%0.03%15.8bp (21.7bp)ZBTB7A/MA0750.1/Jaspar(0.639)
More Information | Similar Motifs Found
motif file (matrix)
10 * T C G A G T A C A G T C T A G C T A G C A C T G A G T C G T A C A C G T A G T C A G T C A G T C A G T C A G C T G C T A A G C T 1e-9-2.268e+011.20%0.01%28.2bp (8.6bp)SP2/MA0516.1/Jaspar(0.688)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C G T G T A C C G T A A G T C C G T A A T C G A C G T A C T G C T A G A G C T A G T C A C T G A G T C 1e-9-2.187e+010.96%0.00%15.4bp (0.0bp)GLI2/MA0734.1/Jaspar(0.736)
More Information | Similar Motifs Found
motif file (matrix)
12 * A T C G C G T A A C T G A C T G A T G C A G T C G T C A G T A C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C 1e-9-2.187e+010.96%0.00%21.0bp (0.0bp)POL008.1_DCE_S_I/Jaspar(0.537)
More Information | Similar Motifs Found
motif file (matrix)
13 * C G T A A C T G C G T A A G T C A C G T C G T A G T C A C G T A A C T G C G T A C G T A A G T C A G T C A G T C C G T A A C T G 1e-9-2.187e+010.96%0.00%20.6bp (0.0bp)Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer(0.638)
More Information | Similar Motifs Found
motif file (matrix)
14 * A T C G A C T G G T C A A C T G A C G T G T A C A G C T A G T C A G C T A C G T 1e-9-2.103e+015.05%0.93%26.6bp (31.7bp)PB0203.1_Zfp691_2/Jaspar(0.694)
More Information | Similar Motifs Found
motif file (matrix)
15 * A G T C G T A C C A T G A G C T A C T G C G T A A T G C C T A G A C G T T G A C 1e-8-1.965e+013.37%0.40%22.7bp (37.0bp)CRE(bZIP)/Promoter/Homer(0.829)
More Information | Similar Motifs Found
motif file (matrix)
16 * A G T C C G T A A C T G G A C T A C G T A G T C A G T C A G T C C G T A C T G A A G T C C G T A A T G C 1e-8-1.934e+011.44%0.03%26.9bp (22.4bp)ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer(0.609)
More Information | Similar Motifs Found
motif file (matrix)
17 * C A G T C A T G A G T C A C G T C A G T A G T C A G T C A G T C T A G C A C T G G C T A A G C T T C G A 1e-8-1.897e+012.40%0.18%30.2bp (32.2bp)POL008.1_DCE_S_I/Jaspar(0.705)
More Information | Similar Motifs Found
motif file (matrix)
18 * C G T A A G T C A C G T A C G T A G T C A G T C A T C G A C T G G C A T T C G A 1e-7-1.744e+012.40%0.21%25.9bp (32.8bp)PB0020.1_Gabpa_1/Jaspar(0.927)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C T G A C G T G T A C A C G T A C G T G T C A C A G T C T G A A G C T C G T A 1e-6-1.581e+010.72%0.00%25.5bp (19.2bp)GATA3/MA0037.2/Jaspar(0.679)
More Information | Similar Motifs Found
motif file (matrix)
20 * C G T A C T G A G T C A A C T G T A C G G C T A A C G T G C A T A C T G A C G T 1e-6-1.581e+010.72%0.00%22.5bp (5.8bp)PB0175.1_Sox4_2/Jaspar(0.679)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C T G T A G C C G T A A C T G G T C A T G A C A C T G A G T C A G T C C T G A T A G C C T G A A G T C 1e-6-1.502e+012.88%0.42%27.9bp (36.1bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.633)
More Information | Similar Motifs Found
motif file (matrix)
22 * A C T G A C G T G T A C C T A G A G T C A T C G A C G T A T C G C T G A A T G C A C T G A T G C A C T G 1e-6-1.485e+011.44%0.06%27.2bp (43.0bp)PB0147.1_Max_2/Jaspar(0.776)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C T G A C T G C G T A A G T C A G T C A C G T A C G T A G T C C G T A A C G T 1e-5-1.374e+010.72%0.01%15.9bp (10.3bp)Esrrg/MA0643.1/Jaspar(0.710)
More Information | Similar Motifs Found
motif file (matrix)
24 * C T G A C G T A C G A T A C G T A C G T A G T C A T G C A G C T C A G T A C G T 1e-5-1.373e+012.16%0.24%29.8bp (30.1bp)EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer(0.848)
More Information | Similar Motifs Found
motif file (matrix)
25 * A C G T A C G T A C G T C G A T A G C T A C T G A C T G A C G T A C G T C G A T C A G T A C G T A G C T A G C T A C G T A C T G 1e-4-1.099e+012.16%0.34%22.1bp (37.8bp)PB0182.1_Srf_2/Jaspar(0.614)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C T G A G T C A C G T A G T C A G T C A C G T 1e-4-1.004e+010.48%0.00%21.0bp (0.0bp)PB0052.1_Plagl1_1/Jaspar(0.603)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C T G A C T G G T A C A C T G C G T A A C G T A C T G A C T G A G T C C T A G A C T G G A T C A C T G 1e-4-9.842e+000.96%0.05%16.5bp (1.7bp)YY2/MA0748.1/Jaspar(0.661)
More Information | Similar Motifs Found
motif file (matrix)