Information for 9-SAGGSCMMCTKKCTKC (Motif 12)

A T C G C G T A A C T G A C T G A T G C A G T C G T C A G T A C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C
Reverse Opposite:
C T A G G T C A C G T A A C T G G T C A G T C A C G T A C T A G C A T G A C G T A C T G A T C G A G T C A G T C A C G T A T G C
p-value:1e-9
log p-value:-2.187e+01
Information Content per bp:1.825
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.2 +/- 21.0bp
Average Position of motif in Background61.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.54
Offset:11
Orientation:forward strand
Alignment:SAGGSCMMCTKKCTKC-
-----------GCTTCC
 A T C G C G T A A C T G A C T G A T G C A G T C G T C A G T A C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-SAGGSCMMCTKKCTKC
CTAGGCCT---------
 A C G T A T C G C G T A A C T G A C T G A T G C A G T C G T C A G T A C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-SAGGSCMMCTKKCTKC
TRAGGTCA---------
 A C G T A T C G C G T A A C T G A C T G A T G C A G T C G T C A G T A C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:SAGGSCMMCTKKCTKC-
-CNGACACCTGTTCNNN
 A T C G C G T A A C T G A C T G A T G C A G T C G T C A G T A C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T
A C G T T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:SAGGSCMMCTKKCTKC
--NNGCACCTTTCTCC
 A T C G C G T A A C T G A C T G A T G C A G T C G T C A G T A C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C
A C G T A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.50
Offset:3
Orientation:forward strand
Alignment:SAGGSCMMCTKKCTKC
---GCCATCTGTT---
 A T C G C G T A A C T G A C T G A T G C A G T C G T C A G T A C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:SAGGSCMMCTKKCTKC
----ACCACATCCTGT
 A T C G C G T A A C T G A C T G A T G C A G T C G T C A G T A C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:SAGGSCMMCTKKCTKC
AAGGTCAC--------
 A T C G C G T A A C T G A C T G A T G C A G T C G T C A G T A C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:SAGGSCMMCTKKCTKC
---TACACCTGTC---
 A T C G C G T A A C T G A C T G A T G C A G T C G T C A G T A C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C
A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-SAGGSCMMCTKKCTKC
CCNNACCATCTGGCCTN
 A C G T A T C G C G T A A C T G A C T G A T G C A G T C G T C A G T A C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T