Information for 9-CCGTGACGTC (Motif 15)

A G T C G T A C C A T G A G C T A C T G C G T A A T G C C T A G A C G T T G A C
Reverse Opposite:
A C T G C G T A A G T C A T C G A C G T A G T C C T G A G T A C C A T G C T A G
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.840
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif3.37%
Number of Background Sequences with motif179.4
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets50.0 +/- 22.7bp
Average Position of motif in Background48.4 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.83
Offset:0
Orientation:forward strand
Alignment:CCGTGACGTC--
CGGTGACGTCAC
 A G T C G T A C C A T G A G C T A C T G C G T A A T G C C T A G A C G T T G A C A C G T A C G T
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.81
Offset:3
Orientation:forward strand
Alignment:CCGTGACGTC
---TGACGT-
 A G T C G T A C C A T G A G C T A C T G C G T A A T G C C T A G A C G T T G A C
A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:3
Score:0.80
Offset:3
Orientation:forward strand
Alignment:CCGTGACGTC-
---TGACGTCA
 A G T C G T A C C A T G A G C T A C T G C G T A A T G C C T A G A C G T T G A C A C G T
A C G T A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

PB0004.1_Atf1_1/Jaspar

Match Rank:4
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CCGTGACGTC-----
NCGATGACGTCATCGN
 A C G T A G T C G T A C C A T G A G C T A C T G C G T A A T G C C T A G A C G T T G A C A C G T A C G T A C G T A C G T A C G T
G A C T G A T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C T C A G G A C T

Atf1/MA0604.1/Jaspar

Match Rank:5
Score:0.77
Offset:2
Orientation:forward strand
Alignment:CCGTGACGTC
--ATGACGTA
 A G T C G T A C C A T G A G C T A C T G C G T A A T G C C T A G A C G T T G A C
A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CCGTGACGTC
NCGTGACN--
 A G T C G T A C C A T G A G C T A C T G C G T A A T G C C T A G A C G T T G A C
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CCGTGACGTC-
-GATGACGTCA
 A G T C G T A C C A T G A G C T A C T G C G T A A T G C C T A G A C G T T G A C A C G T
A C G T T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:8
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CCGTGACGTC---
-GATGACGTCATC
 A G T C G T A C C A T G A G C T A C T G C G T A A T G C C T A G A C G T T G A C A C G T A C G T A C G T
A C G T A C T G T C G A A C G T A C T G C T G A A G T C T C A G A C G T G T A C C T G A A G C T A T G C

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CCGTGACGTC--
NGRTGACGTCAY
 A G T C G T A C C A T G A G C T A C T G C G T A A T G C C T A G A C G T T G A C A C G T A C G T
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T

PB0038.1_Jundm2_1/Jaspar

Match Rank:10
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CCGTGACGTC-----
NCGATGACGTCATCGN
 A C G T A G T C G T A C C A T G A G C T A C T G C G T A A T G C C T A G A C G T T G A C A C G T A C G T A C G T A C G T A C G T
C T G A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T T G A C T A C G T A C G