Information for 1-HMAAVATGGCGGC (Motif 1)

G A T C G T A C C G T A C T G A T C A G C T G A A C G T A C T G T A C G A G T C A T C G T A C G G A T C
Reverse Opposite:
C T A G A T G C T A G C A C T G A G T C A G T C C G T A A G C T A G T C A G C T A C G T C A T G C T A G
p-value:1e-235
log p-value:-5.413e+02
Information Content per bp:1.710
Number of Target Sequences with motif178.0
Percentage of Target Sequences with motif42.79%
Number of Background Sequences with motif443.0
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets52.1 +/- 24.4bp
Average Position of motif in Background57.2 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.98
Offset:1
Orientation:forward strand
Alignment:HMAAVATGGCGGC
-CAAGATGGCGGC
 G A T C G T A C C G T A C T G A T C A G C T G A A C G T A C T G T A C G A G T C A T C G T A C G G A T C
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.96
Offset:1
Orientation:forward strand
Alignment:HMAAVATGGCGGC
-CAAGATGGCGGC
 G A T C G T A C C G T A C T G A T C A G C T G A A C G T A C T G T A C G A G T C A T C G T A C G G A T C
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:HMAAVATGGCGGC-
---TAATGGCGGNC
 G A T C G T A C C G T A C T G A T C A G C T G A A C G T A C T G T A C G A G T C A T C G T A C G G A T C A C G T
A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:HMAAVATGGCGGC-----
--AAAATGGCGCCATTTT
 G A T C G T A C C G T A C T G A T C A G C T G A A C G T A C T G T A C G A G T C A T C G T A C G G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:HMAAVATGGCGGC------
-AAAAATGGCGCCATTTTT
 G A T C G T A C C G T A C T G A T C A G C T G A A C G T A C T G T A C G A G T C A T C G T A C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:HMAAVATGGCGGC-----
-NAGANTGGCGGGGNGNA
 G A T C G T A C C G T A C T G A T C A G C T G A A C G T A C T G T A C G A G T C A T C G T A C G G A T C A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:HMAAVATGGCGGC
AACAGATGGC---
 G A T C G T A C C G T A C T G A T C A G C T G A A C G T A C T G T A C G A G T C A T C G T A C G G A T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---HMAAVATGGCGGC-
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T G A T C G T A C C G T A C T G A T C A G C T G A A C G T A C T G T A C G A G T C A T C G T A C G G A T C A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:HMAAVATGGCGGC
-----TTGGCA--
 G A T C G T A C C G T A C T G A T C A G C T G A A C G T A C T G T A C G A G T C A T C G T A C G G A T C
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:HMAAVATGGCGGC
----NTTGGCANN
 G A T C G T A C C G T A C T G A T C A G C T G A A C G T A C T G T A C G A G T C A T C G T A C G G A T C
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G