Information for 12-TCACAGTGGTCGC (Motif 11)

A C G T G T A C C G T A A G T C C G T A A T C G A C G T A C T G C T A G A G C T A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G C T G A A G T C A G T C C G T A A T G C A C G T A C T G A C G T A C T G C G T A
p-value:1e-9
log p-value:-2.187e+01
Information Content per bp:1.937
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.0 +/- 15.4bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TCACAGTGGTCGC
-CAGTGTGGTCGC
 A C G T G T A C C G T A A G T C C G T A A T C G A C G T A C T G C T A G A G C T A G T C A C T G A G T C
A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

ZBTB7A/MA0750.1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TCACAGTGGTCGC-
--TCGGTGGTCGCN
 A C G T G T A C C G T A A G T C C G T A A T C G A C G T A C T G C T A G A G C T A G T C A C T G A G T C A C G T
A C G T A C G T A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C

ZBTB7C/MA0695.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCACAGTGGTCGC
-NTCGGTGGTCGC
 A C G T G T A C C G T A A G T C C G T A A T C G A C G T A C T G C T A G A G C T A G T C A C T G A G T C
A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCACAGTGGTCGC
NNNNTGCCAGTGATTG-
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G T C C G T A A T C G A C G T A C T G C T A G A G C T A G T C A C T G A G T C
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCACAGTGGTCGC---
NNANTGGTGGTCTTNNN
 A C G T A C G T G T A C C G T A A G T C C G T A A T C G A C G T A C T G C T A G A G C T A G T C A C T G A G T C A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCACAGTGGTCGC---
CGAACAGTGCTCACTAT
 A C G T A C G T G T A C C G T A A G T C C G T A A T C G A C G T A C T G C T A G A G C T A G T C A C T G A G T C A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

ZBTB7B/MA0694.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCACAGTGGTCGC
-TTCGGTGGTCGC
 A C G T G T A C C G T A A G T C C G T A A T C G A C G T A C T G C T A G A G C T A G T C A C T G A G T C
A C G T C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCACAGTGGTCGC
-AACAAAGG----
 A C G T G T A C C G T A A G T C C G T A A T C G A C G T A C T G C T A G A G C T A G T C A C T G A G T C
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCACAGTGGTCGC-
--ACAAAGGNBCCT
 A C G T G T A C C G T A A G T C C G T A A T C G A C G T A C T G C T A G A G C T A G T C A C T G A G T C A C G T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PKNOX1/MA0782.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCACAGTGGTCGC
TGACAGGTGTCA-
 A C G T G T A C C G T A A G T C C G T A A T C G A C G T A C T G C T A G A G C T A G T C A C T G A G T C
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T