Information for 10-AGACTAAAGAACCCAG (Motif 13)

C G T A A C T G C G T A A G T C A C G T C G T A G T C A C G T A A C T G C G T A C G T A A G T C A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G A C T G C G A T C G A T A G T C A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T
p-value:1e-9
log p-value:-2.187e+01
Information Content per bp:1.951
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.8 +/- 20.6bp
Average Position of motif in Background29.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGACTAAAGAACCCAG-----
-RACTACAACTCCCAGVAKGC
 C G T A A C T G C G T A A G T C A C G T C G T A G T C A C G T A A C T G C G T A C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGACTAAAGAACCCAG-----
-AACTACAATTCCCAGAATGC
 C G T A A C T G C G T A A G T C A C G T C G T A G T C A C G T A A C T G C G T A C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGACTAAAGAACCCAG
--ACTACAATTCCC--
 C G T A A C T G C G T A A G T C A C G T C G T A G T C A C G T A A C T G C G T A C G T A A G T C A G T C A G T C C G T A A C T G
A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGACTAAAGAACCCAG
BCAGACWA----------
 A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A G T C A C G T A A C T G C G T A C G T A A G T C A G T C A G T C C G T A A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----AGACTAAAGAACCCAG
AAACAGACAAAGGAAT----
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A G T C A C G T A A C T G C G T A C G T A A G T C A G T C A G T C C G T A A C T G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:AGACTAAAGAACCCAG---
---------TGCCCAGNHW
 C G T A A C T G C G T A A G T C A C G T C G T A G T C A C G T A A C T G C G T A C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PH0174.1_Vax1/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:forward strand
Alignment:AGACTAAAGAACCCAG
ACGTTAATTAACCCAG
 C G T A A C T G C G T A A G T C A C G T C G T A G T C A C G T A A C T G C G T A C G T A A G T C A G T C A G T C C G T A A C T G
T G C A T A G C T C A G C G A T G A C T G T C A G C T A C G A T C A G T C T G A T C G A A G T C G A T C G A T C C G T A C T A G

Tcf7/MA0769.1/Jaspar

Match Rank:8
Score:0.48
Offset:5
Orientation:forward strand
Alignment:AGACTAAAGAACCCAG-
-----AAAGATCAAAGG
 C G T A A C T G C G T A A G T C A C G T C G T A G T C A C G T A A C T G C G T A C G T A A G T C A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

Hoxd3/MA0912.1/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:AGACTAAAGAACCCAG
ANGNTAATTANCNCAN
 C G T A A C T G C G T A A G T C A C G T C G T A G T C A C G T A A C T G C G T A C G T A A G T C A G T C A G T C C G T A A C T G
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A

PH0079.1_Hoxd3/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:AGACTAAAGAACCCAG
ANGNTAATTANCNCAN
 C G T A A C T G C G T A A G T C A C G T C G T A G T C A C G T A A C T G C G T A C G T A A G T C A G T C A G T C C G T A A C T G
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A