Homer de novo Motif Results (hs_ChronicMyelogenousLeukemia_K562_cancer_BHLHE40_SRX150695_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 836
Total background sequences = 44591
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C A G T A G T C C T G A G A T C A C T G A C G T A C T G G T A C A G T C A G T C 1e-109-2.521e+0225.60%3.79%20.3bp (39.4bp)BHLHE40/MA0464.2/Jaspar(0.977)
More Information | Similar Motifs Found
motif file (matrix)
2 A C T G T C A G A T G C T A G C G C T A A T G C G A T C C T G A A T C G C T A G A C T G C A T G T C A G G T A C C T A G T A G C 1e-77-1.782e+0212.20%0.92%20.5bp (27.3bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.956)
More Information | Similar Motifs Found
motif file (matrix)
3 A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C C G A T A T G C 1e-37-8.720e+018.01%0.98%22.3bp (31.9bp)Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer(0.980)
More Information | Similar Motifs Found
motif file (matrix)
4 T C A G T C G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G C T A G T C G T A C T A G C 1e-33-7.807e+017.18%0.88%23.5bp (33.8bp)Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer(0.983)
More Information | Similar Motifs Found
motif file (matrix)
5 A C T G A C T G G A C T A C T G A C T G A G T C C T G A A T G C A G C T C T A G A G C T A G C T A C T G 1e-16-3.710e+011.20%0.01%23.1bp (29.9bp)Hic1/MA0739.1/Jaspar(0.655)
More Information | Similar Motifs Found
motif file (matrix)
6 G T A C C A T G A G T C A G T C A G T C A G T C A G T C C T A G A G T C T C G A A G T C A T C G A G T C G T C A A T C G A C T G 1e-15-3.640e+010.84%0.00%23.0bp (0.0bp)PB0010.1_Egr1_1/Jaspar(0.753)
More Information | Similar Motifs Found
motif file (matrix)
7 C T G A A C T G C G A T C T G A A C G T C G T A A T C G C G T A C T A G C G T A A C G T C G T A A G T C 1e-13-3.047e+010.72%0.00%25.1bp (0.0bp)PB0198.1_Zfp128_2/Jaspar(0.652)
More Information | Similar Motifs Found
motif file (matrix)
8 A T G C C T A G A G T C A C T G A C G T A C T G G A C T A C G T A G T C A C T G G T A C A C G T A G T C G T A C A G T C A T C G 1e-13-3.047e+010.72%0.00%15.8bp (0.0bp)MAX/MA0058.3/Jaspar(0.628)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C G T C A G T C G A T C T G A A C G T A G T C C T G A A C T G A G T C G A C T 1e-11-2.708e+012.27%0.26%27.8bp (30.5bp)PB0022.1_Gata5_1/Jaspar(0.731)
More Information | Similar Motifs Found
motif file (matrix)
10 * A G T C C G A T A C T G C T G A A G T C A C G T A C G T A G C T A C G T A C T G C T G A A G T C C T G A 1e-11-2.632e+010.72%0.00%24.8bp (9.0bp)Nr2f6/MA0677.1/Jaspar(0.703)
More Information | Similar Motifs Found
motif file (matrix)
11 * A T G C A G T C C G T A T A C G T A G C G T A C C G T A A C G T A G T C A G T C G A C T A C G T C T A G 1e-11-2.579e+011.20%0.04%24.1bp (25.7bp)Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer(0.734)
More Information | Similar Motifs Found
motif file (matrix)
12 * A G T C A T G C A C G T A C T G T A G C C G T A A G T C C G A T G T A C A C G T A C T G A C G T A T C G G T C A A C G T A T G C 1e-10-2.520e+010.84%0.01%29.6bp (23.6bp)VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer(0.567)
More Information | Similar Motifs Found
motif file (matrix)
13 * T C G A A C T G A T C G C T G A T G C A A C T G A G T C T A G C G A C T A T C G T G A C C G T A A C T G 1e-10-2.507e+011.44%0.08%26.7bp (24.2bp)Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer(0.585)
More Information | Similar Motifs Found
motif file (matrix)
14 * A G T C A C G T A C T G A C T G A T G C A G C T G T A C A C G T A C T G A G C T A G T C A C G T A T C G A G T C C G T A A T C G 1e-10-2.469e+010.60%0.00%21.5bp (0.0bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.593)
More Information | Similar Motifs Found
motif file (matrix)
15 * T G A C A C T G A G T C C G A T A C T G A C T G A T C G C G A T A C T G C T A G C G T A C T G A A C T G A G T C G T C A T G C A 1e-10-2.469e+010.60%0.00%9.8bp (0.0bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.598)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C G T A T C G A G C T C G T A A C T G A C T G A C T G C G T A A G T C G T A C A C T G A G T C C T G A A C T G A T C G A G T C 1e-10-2.394e+010.84%0.01%27.2bp (26.1bp)ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer(0.577)
More Information | Similar Motifs Found
motif file (matrix)
17 * A T C G C G A T A C G T A C T G C A T G A T G C C G A T A G T C G T A C A T G C 1e-10-2.364e+011.67%0.15%21.1bp (34.1bp)POL013.1_MED-1/Jaspar(0.751)
More Information | Similar Motifs Found
motif file (matrix)
18 * C G T A A C G T C T A G C G A T A C T G A T C G C G A T A G C T C G A T T C A G 1e-9-2.178e+011.91%0.24%29.7bp (29.4bp)RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer(0.888)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C G C T A A G T C C T G A T A G C C T A G A C T G A G T C A G C T A T C G 1e-9-2.170e+012.03%0.28%23.4bp (35.0bp)POL010.1_DCE_S_III/Jaspar(0.644)
More Information | Similar Motifs Found
motif file (matrix)
20 * A T G C C T G A A T G C G T A C C G A T A C T G A G T C T C G A A C T G C T A G C G A T A C T G A T C G 1e-9-2.135e+012.39%0.41%21.9bp (30.9bp)Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer(0.749)
More Information | Similar Motifs Found
motif file (matrix)
21 * A T G C G T C A C T A G A C T G A G T C C G T A A G T C A T G C C T G A A C T G A C T G A C T G A C G T 1e-9-2.115e+010.84%0.02%22.8bp (23.9bp)PB0200.1_Zfp187_2/Jaspar(0.662)
More Information | Similar Motifs Found
motif file (matrix)
22 * A C T G A C T G G C A T G C T A A G T C A G T C A C G T A G T C A G T C A G T C A G T C A G T C C G T A 1e-9-2.087e+010.72%0.01%29.0bp (19.7bp)MZF1/MA0056.1/Jaspar(0.684)
More Information | Similar Motifs Found
motif file (matrix)
23 * C G T A T A C G C G T A A C G T A C T G C G T A A C T G A G T C A G T C A C G T A T G C A G T C A G C T 1e-8-1.980e+010.72%0.02%16.7bp (23.4bp)PB0203.1_Zfp691_2/Jaspar(0.604)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C G T A G T C A G T C A T C G A C G T A C T G C G T A A C G T G T C A C G T A 1e-8-1.977e+010.84%0.03%27.6bp (17.0bp)Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer(0.716)
More Information | Similar Motifs Found
motif file (matrix)
25 * C G T A A C G T A G T C G T C A A G T C C T A G A G T C A G T C G A T C A G T C A C G T A C T G A G T C 1e-8-1.910e+010.48%0.00%29.5bp (0.0bp)Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer(0.668)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C G T C G T A A G T C A C G T A C G T A G T C A G T C C G T A A C G T A G T C C G T A A G T C A C T G 1e-8-1.910e+010.48%0.00%20.2bp (35.4bp)Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer(0.641)
More Information | Similar Motifs Found
motif file (matrix)
27 * A G T C A C G T A C T G A T C G A C G T A G C T A C G T A G T C A C G T A C G T C G T A A C T G A G T C 1e-8-1.910e+010.48%0.00%13.9bp (0.0bp)PB0021.1_Gata3_1/Jaspar(0.629)
More Information | Similar Motifs Found
motif file (matrix)
28 * C G T A C G T A C G T A A G T C G T C A A C T G A G T C A G C T C G T A G T C A A G T C A C G T A G T C 1e-7-1.781e+010.60%0.01%28.4bp (18.7bp)MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer(0.634)
More Information | Similar Motifs Found
motif file (matrix)
29 * A G C T G T A C A G C T A G T C G T A C C G T A T A G C C G T A A T G C G C T A A G T C C G T A A C T G A T G C C G T A C T A G 1e-7-1.774e+010.96%0.05%25.4bp (24.2bp)POL009.1_DCE_S_II/Jaspar(0.680)
More Information | Similar Motifs Found
motif file (matrix)
30 * A G C T A G T C C T G A A G T C A C G T A G T C C G T A A T G C A G T C C G T A A C T G C G T A C G A T C T A G A T G C C G T A 1e-5-1.374e+010.36%0.00%28.3bp (0.0bp)Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer(0.606)
More Information | Similar Motifs Found
motif file (matrix)
31 * A C G T A C G T A G T C C G T A A G T C C G T A A C T G C G T A A C T G A G T C 1e-5-1.360e+010.48%0.01%19.5bp (23.4bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.619)
More Information | Similar Motifs Found
motif file (matrix)
32 * A C T G A C T G A G C T A C T G A C T G C G T A C G T A A C G T A C T G C T G A A G T C C G T A A G T C 1e-3-8.658e+000.24%0.00%10.0bp (0.0bp)TEAD3/MA0808.1/Jaspar(0.675)
More Information | Similar Motifs Found
motif file (matrix)