Information for 5-GGTGGCACTGTBG (Motif 5)

A C T G A C T G G A C T A C T G A C T G A G T C C T G A A T G C A G C T C T A G A G C T A G C T A C T G
Reverse Opposite:
A G T C T C G A C T G A A G T C C T G A A T C G A G C T A C T G A G T C A G T C C G T A A G T C A G T C
p-value:1e-16
log p-value:-3.710e+01
Information Content per bp:1.864
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.3 +/- 23.1bp
Average Position of motif in Background45.3 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGCACTGTBG
GGTTGGCAT-----
 A C G T A C T G A C T G G A C T A C T G A C T G A G T C C T G A A T G C A G C T C T A G A G C T A G C T A C T G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGCACTGTBG
NGTAGGTTGGCATNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G G A C T A C T G A C T G A G T C C T G A A T G C A G C T C T A G A G C T A G C T A C T G
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGTGGCACTGTBG
AGGTGTCA------
 A C G T A C T G A C T G G A C T A C T G A C T G A G T C C T G A A T G C A G C T C T A G A G C T A G C T A C T G
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.59
Offset:-9
Orientation:reverse strand
Alignment:---------GGTGGCACTGTBG
TGGCCACCAGGTGGCACTNT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G G A C T A C T G A C T G A G T C C T G A A T G C A G C T C T A G A G C T A G C T A C T G
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTGGCACTGTBG
NTTGGCANN----
 A C T G A C T G G A C T A C T G A C T G A G T C C T G A A T G C A G C T C T A G A G C T A G C T A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------GGTGGCACTGTBG
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G G A C T A C T G A C T G A G T C C T G A A T G C A G C T C T A G A G C T A G C T A C T G
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGTGGCACTGTBG
-TTGGCA------
 A C T G A C T G G A C T A C T G A C T G A G T C C T G A A T G C A G C T C T A G A G C T A G C T A C T G
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGTGGCACTGTBG--
GGNGCGNCTGTTNNN
 A C T G A C T G G A C T A C T G A C T G A G T C C T G A A T G C A G C T C T A G A G C T A G C T A C T G A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGCACTGTBG
TNNNNGGTGTCATNTNT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G G A C T A C T G A C T G A G T C C T G A A T G C A G C T C T A G A G C T A G C T A C T G
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGCACTGTBG
NNTTGGCANN----
 A C G T A C T G A C T G G A C T A C T G A C T G A G T C C T G A A T G C A G C T C T A G A G C T A G C T A C T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T