Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-88 | -2.028e+02 | 0.0000 | 96.0 | 11.48% | 261.7 | 0.59% | motif file (matrix) |
svg |
2 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-81 | -1.873e+02 | 0.0000 | 196.0 | 23.44% | 1980.3 | 4.45% | motif file (matrix) |
svg |
3 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-79 | -1.822e+02 | 0.0000 | 158.0 | 18.90% | 1247.0 | 2.80% | motif file (matrix) |
svg |
4 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-68 | -1.579e+02 | 0.0000 | 162.0 | 19.38% | 1575.6 | 3.54% | motif file (matrix) |
svg |
5 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-65 | -1.504e+02 | 0.0000 | 181.0 | 21.65% | 2107.9 | 4.73% | motif file (matrix) |
svg |
6 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-63 | -1.470e+02 | 0.0000 | 97.0 | 11.60% | 499.2 | 1.12% | motif file (matrix) |
svg |
7 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-58 | -1.341e+02 | 0.0000 | 275.0 | 32.89% | 5196.8 | 11.67% | motif file (matrix) |
svg |
8 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-53 | -1.224e+02 | 0.0000 | 252.0 | 30.14% | 4723.0 | 10.60% | motif file (matrix) |
svg |
9 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-50 | -1.171e+02 | 0.0000 | 172.0 | 20.57% | 2406.8 | 5.40% | motif file (matrix) |
svg |
10 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-46 | -1.075e+02 | 0.0000 | 193.0 | 23.09% | 3203.8 | 7.19% | motif file (matrix) |
svg |
11 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-46 | -1.063e+02 | 0.0000 | 102.0 | 12.20% | 896.6 | 2.01% | motif file (matrix) |
svg |
12 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-45 | -1.051e+02 | 0.0000 | 150.0 | 17.94% | 2028.3 | 4.55% | motif file (matrix) |
svg |
13 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-43 | -9.979e+01 | 0.0000 | 116.0 | 13.88% | 1271.3 | 2.85% | motif file (matrix) |
svg |
14 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-39 | -9.020e+01 | 0.0000 | 86.0 | 10.29% | 747.3 | 1.68% | motif file (matrix) |
svg |
15 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-38 | -8.808e+01 | 0.0000 | 102.0 | 12.20% | 1109.8 | 2.49% | motif file (matrix) |
svg |
16 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-38 | -8.783e+01 | 0.0000 | 89.0 | 10.65% | 833.0 | 1.87% | motif file (matrix) |
svg |
17 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-36 | -8.465e+01 | 0.0000 | 148.0 | 17.70% | 2367.1 | 5.31% | motif file (matrix) |
svg |
18 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-33 | -7.796e+01 | 0.0000 | 207.0 | 24.76% | 4457.7 | 10.01% | motif file (matrix) |
svg |
19 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-33 | -7.688e+01 | 0.0000 | 128.0 | 15.31% | 1958.9 | 4.40% | motif file (matrix) |
svg |
20 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-31 | -7.365e+01 | 0.0000 | 70.0 | 8.37% | 605.8 | 1.36% | motif file (matrix) |
svg |
21 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-29 | -6.844e+01 | 0.0000 | 83.0 | 9.93% | 944.0 | 2.12% | motif file (matrix) |
svg |
22 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-28 | -6.459e+01 | 0.0000 | 75.0 | 8.97% | 815.3 | 1.83% | motif file (matrix) |
svg |
23 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-26 | -6.176e+01 | 0.0000 | 76.0 | 9.09% | 877.0 | 1.97% | motif file (matrix) |
svg |
24 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-26 | -6.032e+01 | 0.0000 | 82.0 | 9.81% | 1043.6 | 2.34% | motif file (matrix) |
svg |
25 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-25 | -5.916e+01 | 0.0000 | 91.0 | 10.89% | 1294.7 | 2.91% | motif file (matrix) |
svg |
26 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-24 | -5.713e+01 | 0.0000 | 83.0 | 9.93% | 1122.2 | 2.52% | motif file (matrix) |
svg |
27 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-23 | -5.425e+01 | 0.0000 | 52.0 | 6.22% | 456.1 | 1.02% | motif file (matrix) |
svg |
28 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-20 | -4.813e+01 | 0.0000 | 38.0 | 4.55% | 260.2 | 0.58% | motif file (matrix) |
svg |
29 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-19 | -4.389e+01 | 0.0000 | 40.0 | 4.78% | 332.8 | 0.75% | motif file (matrix) |
svg |
30 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-18 | -4.341e+01 | 0.0000 | 91.0 | 10.89% | 1642.7 | 3.69% | motif file (matrix) |
svg |
31 |
| E-box(bHLH)/Promoter/Homer | 1e-15 | -3.485e+01 | 0.0000 | 36.0 | 4.31% | 350.6 | 0.79% | motif file (matrix) |
svg |
32 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-12 | -2.826e+01 | 0.0000 | 24.0 | 2.87% | 187.2 | 0.42% | motif file (matrix) |
svg |
33 |
| HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer | 1e-7 | -1.824e+01 | 0.0000 | 49.0 | 5.86% | 1050.8 | 2.36% | motif file (matrix) |
svg |
34 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-6 | -1.528e+01 | 0.0000 | 10.0 | 1.20% | 58.1 | 0.13% | motif file (matrix) |
svg |
35 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.312e+01 | 0.0000 | 10.0 | 1.20% | 74.7 | 0.17% | motif file (matrix) |
svg |
36 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.245e+01 | 0.0000 | 54.0 | 6.46% | 1474.8 | 3.31% | motif file (matrix) |
svg |
37 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-5 | -1.224e+01 | 0.0000 | 50.0 | 5.98% | 1333.9 | 2.99% | motif file (matrix) |
svg |
38 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.223e+01 | 0.0000 | 84.0 | 10.05% | 2691.6 | 6.04% | motif file (matrix) |
svg |
39 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-5 | -1.183e+01 | 0.0001 | 216.0 | 25.84% | 8741.0 | 19.62% | motif file (matrix) |
svg |
40 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-5 | -1.155e+01 | 0.0001 | 93.0 | 11.12% | 3124.8 | 7.01% | motif file (matrix) |
svg |
41 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-4 | -1.135e+01 | 0.0001 | 67.0 | 8.01% | 2051.7 | 4.61% | motif file (matrix) |
svg |
42 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-4 | -1.130e+01 | 0.0001 | 75.0 | 8.97% | 2383.3 | 5.35% | motif file (matrix) |
svg |
43 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-4 | -1.073e+01 | 0.0002 | 63.0 | 7.54% | 1930.5 | 4.33% | motif file (matrix) |
svg |
44 |
| ETS(ETS)/Promoter/Homer | 1e-4 | -1.065e+01 | 0.0002 | 34.0 | 4.07% | 821.6 | 1.84% | motif file (matrix) |
svg |
45 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-4 | -1.061e+01 | 0.0002 | 62.0 | 7.42% | 1897.5 | 4.26% | motif file (matrix) |
svg |
46 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-4 | -1.035e+01 | 0.0003 | 85.0 | 10.17% | 2879.9 | 6.46% | motif file (matrix) |
svg |
47 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-4 | -1.016e+01 | 0.0003 | 193.0 | 23.09% | 7857.3 | 17.64% | motif file (matrix) |
svg |
48 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-4 | -9.717e+00 | 0.0005 | 46.0 | 5.50% | 1315.7 | 2.95% | motif file (matrix) |
svg |
49 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-4 | -9.374e+00 | 0.0006 | 97.0 | 11.60% | 3493.0 | 7.84% | motif file (matrix) |
svg |
50 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.205e+00 | 0.0020 | 48.0 | 5.74% | 1489.3 | 3.34% | motif file (matrix) |
svg |
51 |
| PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -8.157e+00 | 0.0020 | 33.0 | 3.95% | 901.0 | 2.02% | motif file (matrix) |
svg |
52 |
| CRE(bZIP)/Promoter/Homer | 1e-3 | -7.468e+00 | 0.0040 | 30.0 | 3.59% | 822.5 | 1.85% | motif file (matrix) |
svg |
53 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.140e+00 | 0.0054 | 7.0 | 0.84% | 78.9 | 0.18% | motif file (matrix) |
svg |
54 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-3 | -7.113e+00 | 0.0055 | 100.0 | 11.96% | 3872.9 | 8.69% | motif file (matrix) |
svg |
55 |
| HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-3 | -7.060e+00 | 0.0057 | 44.0 | 5.26% | 1405.2 | 3.15% | motif file (matrix) |
svg |
56 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.890e+00 | 0.0066 | 58.0 | 6.94% | 2012.4 | 4.52% | motif file (matrix) |
svg |
57 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -6.601e+00 | 0.0087 | 20.0 | 2.39% | 493.9 | 1.11% | motif file (matrix) |
svg |
58 |
| ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.530e+00 | 0.0092 | 11.0 | 1.32% | 196.6 | 0.44% | motif file (matrix) |
svg |
59 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -6.495e+00 | 0.0093 | 38.0 | 4.55% | 1198.2 | 2.69% | motif file (matrix) |
svg |
60 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.388e+00 | 0.0100 | 10.0 | 1.20% | 170.3 | 0.38% | motif file (matrix) |
svg |
61 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-2 | -6.388e+00 | 0.0100 | 10.0 | 1.20% | 170.3 | 0.38% | motif file (matrix) |
svg |
62 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -6.353e+00 | 0.0102 | 38.0 | 4.55% | 1208.6 | 2.71% | motif file (matrix) |
svg |
63 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -6.106e+00 | 0.0129 | 293.0 | 35.05% | 13547.4 | 30.41% | motif file (matrix) |
svg |
64 |
| ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.903e+00 | 0.0155 | 8.0 | 0.96% | 124.1 | 0.28% | motif file (matrix) |
svg |
65 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.880e+00 | 0.0156 | 81.0 | 9.69% | 3147.4 | 7.07% | motif file (matrix) |
svg |
66 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.799e+00 | 0.0167 | 66.0 | 7.89% | 2473.0 | 5.55% | motif file (matrix) |
svg |
67 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -5.739e+00 | 0.0175 | 40.0 | 4.78% | 1338.0 | 3.00% | motif file (matrix) |
svg |
68 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.737e+00 | 0.0175 | 36.0 | 4.31% | 1170.4 | 2.63% | motif file (matrix) |
svg |
69 |
| LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.665e+00 | 0.0183 | 6.0 | 0.72% | 76.5 | 0.17% | motif file (matrix) |
svg |
70 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -5.655e+00 | 0.0183 | 28.0 | 3.35% | 848.2 | 1.90% | motif file (matrix) |
svg |
71 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.634e+00 | 0.0183 | 52.0 | 6.22% | 1866.8 | 4.19% | motif file (matrix) |
svg |
72 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.613e+00 | 0.0185 | 29.0 | 3.47% | 891.4 | 2.00% | motif file (matrix) |
svg |
73 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.452e+00 | 0.0214 | 125.0 | 14.95% | 5286.0 | 11.87% | motif file (matrix) |
svg |
74 |
| SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer | 1e-2 | -5.441e+00 | 0.0214 | 15.0 | 1.79% | 363.5 | 0.82% | motif file (matrix) |
svg |
75 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.367e+00 | 0.0227 | 16.0 | 1.91% | 402.5 | 0.90% | motif file (matrix) |
svg |
76 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-2 | -5.285e+00 | 0.0243 | 29.0 | 3.47% | 913.3 | 2.05% | motif file (matrix) |
svg |
77 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.272e+00 | 0.0243 | 38.0 | 4.55% | 1291.2 | 2.90% | motif file (matrix) |
svg |
78 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-2 | -5.153e+00 | 0.0270 | 3.0 | 0.36% | 19.1 | 0.04% | motif file (matrix) |
svg |
79 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-2 | -4.932e+00 | 0.0332 | 38.0 | 4.55% | 1320.1 | 2.96% | motif file (matrix) |
svg |
80 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -4.919e+00 | 0.0332 | 102.0 | 12.20% | 4267.9 | 9.58% | motif file (matrix) |
svg |
81 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -4.837e+00 | 0.0357 | 17.0 | 2.03% | 464.7 | 1.04% | motif file (matrix) |
svg |