Information for 4-CRCGTGYTCKMKCCCG (Motif 8)

A T G C C T A G A G T C A C T G A C G T A C T G G A C T A C G T A G T C A C T G G T A C A C G T A G T C G T A C A G T C A T C G
Reverse Opposite:
A T G C A C T G A C T G A C T G G T C A A C T G G T A C A C T G C G T A C T A G A G T C C G T A A G T C A C T G A G T C A T C G
p-value:1e-13
log p-value:-3.047e+01
Information Content per bp:1.866
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 15.8bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAX/MA0058.3/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CRCGTGYTCKMKCCCG
NNCACGTGGT--------
 A C G T A C G T A T G C C T A G A G T C A C T G A C G T A C T G G A C T A C G T A G T C A C T G G T A C A C G T A G T C G T A C A G T C A T C G
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CRCGTGYTCKMKCCCG
ACCACGTGCTC-------
 A C G T A C G T A T G C C T A G A G T C A C T G A C G T A C T G G A C T A C G T A G T C A C T G G T A C A C G T A G T C G T A C A G T C A T C G
C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CRCGTGYTCKMKCCCG
NGCACGTGNT--------
 A C G T A C G T A T G C C T A G A G T C A C T G A C G T A C T G G A C T A C G T A G T C A C T G G T A C A C G T A G T C G T A C A G T C A T C G
C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CRCGTGYTCKMKCCCG
AACACGTGTT--------
 A C G T A C G T A T G C C T A G A G T C A C T G A C G T A C T G G A C T A C G T A G T C A C T G G T A C A C G T A G T C G T A C A G T C A T C G
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CRCGTGYTCKMKCCCG
CACGTGNT--------
 A T G C C T A G A G T C A C T G A C G T A C T G G A C T A C G T A G T C A C T G G T A C A C G T A G T C G T A C A G T C A T C G
G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0043.1_Max_1/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CRCGTGYTCKMKCCCG
CCNNANCACGTGGTCN------
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T A G A G T C A C T G A C G T A C T G G A C T A C G T A G T C A C T G G T A C A C G T A G T C G T A C A G T C A T C G
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CRCGTGYTCKMKCCCG
ACCACGTGGTNN------
 A C G T A C G T A T G C C T A G A G T C A C T G A C G T A C T G G A C T A C G T A G T C A C T G G T A C A C G T A G T C G T A C A G T C A T C G
T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CRCGTGYTCKMKCCCG
NNCGCGTGNN--------
 A C G T A C G T A T G C C T A G A G T C A C T G A C G T A C T G G A C T A C G T A G T C A C T G G T A C A C G T A G T C G T A C A G T C A T C G
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CRCGTGYTCKMKCCCG
TCACGTGC---------
 A C G T A T G C C T A G A G T C A C T G A C G T A C T G G A C T A C G T A G T C A C T G G T A C A C G T A G T C G T A C A G T C A T C G
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CRCGTGYTCKMKCCCG
CACGTGBN--------
 A T G C C T A G A G T C A C T G A C G T A C T G G A C T A C G T A G T C A C T G G T A C A C G T A G T C G T A C A G T C A T C G
G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T