Information for 11-TCTCCACACACAGCAD (Motif 29)

A G C T G T A C A G C T A G T C G T A C C G T A T A G C C G T A A T G C G C T A A G T C C G T A A C T G A T G C C G T A C T A G
Reverse Opposite:
G A C T G C A T A T C G A G T C A C G T A C T G C A G T A T C G A C G T A T C G C G A T C A T G T C A G C T G A A C T G C T G A
p-value:1e-7
log p-value:-1.774e+01
Information Content per bp:1.705
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif23.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.9 +/- 25.4bp
Average Position of motif in Background62.2 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.68
Offset:8
Orientation:reverse strand
Alignment:TCTCCACACACAGCAD
--------CACAGN--
 A G C T G T A C A G C T A G T C G T A C C G T A T A G C C G T A A T G C G C T A A G T C C G T A A C T G A T G C C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.67
Offset:5
Orientation:forward strand
Alignment:TCTCCACACACAGCAD----
-----CCACACAGCAGGAGA
 A G C T G T A C A G C T A G T C G T A C C G T A T A G C C G T A A T G C G C T A A G T C C G T A A C T G A T G C C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TCTCCACACACAGCAD----
-----GAGCACAGCAGGACA
 A G C T G T A C A G C T A G T C G T A C C G T A T A G C C G T A A T G C G C T A A G T C C G T A A C T G A T G C C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TCTCCACACACAGCAD----
-----CCACACAGCAGGAGA
 A G C T G T A C A G C T A G T C G T A C C G T A T A G C C G T A A T G C G C T A A G T C C G T A A C T G A T G C C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.64
Offset:8
Orientation:forward strand
Alignment:TCTCCACACACAGCAD----
--------CACAGCAGGGGG
 A G C T G T A C A G C T A G T C G T A C C G T A T A G C C G T A A T G C G C T A A G T C C G T A A C T G A T G C C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:TCTCCACACACAGCAD-
-------DCTCAGCAGG
 A G C T G T A C A G C T A G T C G T A C C G T A T A G C C G T A A T G C G C T A A G T C C G T A A C T G A T G C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCTCCACACACAGCAD----
WNTGCTGASTCAGCANWTTY
 A G C T G T A C A G C T A G T C G T A C C G T A T A G C C G T A A T G C G C T A A G T C C G T A A C T G A T G C C G T A C T A G A C G T A C G T A C G T A C G T
C G T A G A C T C G A T A T C G G T A C G C A T C A T G C G T A T A C G G C A T G T A C C G T A C A T G A T G C G C T A C T A G G C A T G C A T G C A T G A C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TCTCCACACACAGCAD------
-------DCHCAGCAGGRGGCC
 A G C T G T A C A G C T A G T C G T A C C G T A T A G C C G T A A T G C G C T A A G T C C G T A A C T G A T G C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TCTCCACACACAGCAD---
----CTGAGTCAGCAATTT
 A G C T G T A C A G C T A G T C G T A C C G T A T A G C C G T A A T G C G C T A A G T C C G T A A C T G A T G C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

MAFF/MA0495.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCTCCACACACAGCAD-----
---GCTGAGTCAGCAATTTTT
 A G C T G T A C A G C T A G T C G T A C C G T A T A G C C G T A A T G C G C T A A G T C C G T A A C T G A T G C C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T