Information for 1-TCACGTGMCY (Motif 1)

C A G T A G T C C T G A G A T C A C T G A C G T A C T G G T A C A G T C A G T C
Reverse Opposite:
T C A G T C A G C A T G G T A C T G C A A G T C C T A G A G C T A C T G G T C A
p-value:1e-109
log p-value:-2.521e+02
Information Content per bp:1.656
Number of Target Sequences with motif214.0
Percentage of Target Sequences with motif25.60%
Number of Background Sequences with motif1690.0
Percentage of Background Sequences with motif3.79%
Average Position of motif in Targets55.1 +/- 20.3bp
Average Position of motif in Background49.4 +/- 39.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BHLHE40/MA0464.2/Jaspar

Match Rank:1
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-TCACGTGMCY
ATCACGTGAC-
 A C G T C A G T A G T C C T G A G A T C A C T G A C G T A C T G G T A C A G T C A G T C
T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.97
Offset:0
Orientation:forward strand
Alignment:TCACGTGMCY
KCACGTGMCN
 C A G T A G T C C T G A G A T C A C T G A C G T A C T G G T A C A G T C A G T C
C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TCACGTGMCY
TCACGTGACC
 C A G T A G T C C T G A G A T C A C T G A C G T A C T G G T A C A G T C A G T C
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:TCACGTGMCY
-CACGTGNC-
 C A G T A G T C C T G A G A T C A C T G A C G T A C T G G T A C A G T C A G T C
A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:TCACGTGMCY
-CACGTGDC-
 C A G T A G T C C T G A G A T C A C T G A C G T A C T G G T A C A G T C A G T C
A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T

Arntl/MA0603.1/Jaspar

Match Rank:6
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TCACGTGMCY
NCACGTGACN
 C A G T A G T C C T G A G A T C A C T G A C G T A C T G G T A C A G T C A G T C
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

TFE3/MA0831.1/Jaspar

Match Rank:7
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-TCACGTGMCY
ATCACGTGAC-
 A C G T C A G T A G T C C T G A G A T C A C T G A C G T A C T G G T A C A G T C A G T C
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:8
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-TCACGTGMCY
GTCACGTGAC-
 A C G T C A G T A G T C C T G A G A T C A C T G A C G T A C T G G T A C A G T C A G T C
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T

MLXIPL/MA0664.1/Jaspar

Match Rank:9
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-TCACGTGMCY
ATCACGTGAT-
 A C G T C A G T A G T C C T G A G A T C A C T G A C G T A C T G G T A C A G T C A G T C
C T G A C G A T A G T C G T C A A G T C A T C G G C A T A T C G G T C A G A C T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:TCACGTGMCY
-CACGTG---
 C A G T A G T C C T G A G A T C A C T G A C G T A C T G G T A C A G T C A G T C
A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T