Information for 1-GGCCACYAGRGGGCGC (Motif 2)

A C T G T C A G A T G C T A G C G C T A A T G C G A T C C T G A A T C G C T A G A C T G C A T G T C A G G T A C C T A G T A G C
Reverse Opposite:
A T C G A G T C C A T G A G T C G T A C T G A C G A T C A T G C G A C T C T A G T A C G C G A T A C T G T A C G A G T C T G A C
p-value:1e-77
log p-value:-1.782e+02
Information Content per bp:1.580
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif12.20%
Number of Background Sequences with motif409.1
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets51.8 +/- 20.5bp
Average Position of motif in Background50.2 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:GGCCACYAGRGGGCGC-----
-GCCASCAGGGGGCGCYVNNG
 A C T G T C A G A T G C T A G C G C T A A T G C G A T C C T G A A T C G C T A G A C T G C A T G T C A G G T A C C T A G T A G C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-GGCCACYAGRGGGCGC--
TGGCCACCAGGGGGCGCTA
 A C G T A C T G T C A G A T G C T A G C G C T A A T G C G A T C C T G A A T C G C T A G A C T G C A T G T C A G G T A C C T A G T A G C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACYAGRGGGCGC---
TGGCCACCAGGTGGCACTNT
 A C G T A C T G T C A G A T G C T A G C G C T A A T G C G A T C C T G A A T C G C T A G A C T G C A T G T C A G G T A C C T A G T A G C A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GGCCACYAGRGGGCGC----
---NNNAAGGGGGCGGGNNN
 A C T G T C A G A T G C T A G C G C T A A T G C G A T C C T G A A T C G C T A G A C T G C A T G T C A G G T A C C T A G T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGCCACYAGRGGGCGC
NCNCAGCGGGGGGTC-
 A C T G T C A G A T G C T A G C G C T A A T G C G A T C C T G A A T C G C T A G A C T G C A T G T C A G G T A C C T A G T A G C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCCACYAGRGGGCGC
DCHCAGCAGGRGGCC-
 A C T G T C A G A T G C T A G C G C T A A T G C G A T C C T G A A T C G C T A G A C T G C A T G T C A G G T A C C T A G T A G C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGCCACYAGRGGGCGC
----AACAGATGGC--
 A C T G T C A G A T G C T A G C G C T A A T G C G A T C C T G A A T C G C T A G A C T G C A T G T C A G G T A C C T A G T A G C
A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.60
Offset:7
Orientation:forward strand
Alignment:GGCCACYAGRGGGCGC---
-------RGKGGGCGKGGC
 A C T G T C A G A T G C T A G C G C T A A T G C G A T C C T G A A T C G C T A G A C T G C A T G T C A G G T A C C T A G T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGCCACYAGRGGGCGC
-CCCCCCCGGGGGNN-
 A C T G T C A G A T G C T A G C G C T A A T G C G A T C C T G A A T C G C T A G A C T G C A T G T C A G G T A C C T A G T A G C
A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCCACYAGRGGGCGC
NCCCCCCCGGGGGGN-
 A C T G T C A G A T G C T A G C G C T A A T G C G A T C C T G A A T C G C T A G A C T G C A T G T C A G G T A C C T A G T A G C
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T