Information for 10-AGGAAGCCTGCAG (Motif 13)

T C G A A C T G A T C G C T G A T G C A A C T G A G T C T A G C G A C T A T C G T G A C C G T A A C T G
Reverse Opposite:
G T A C G C A T A C T G A T G C C T G A A C T G A C T G G T A C A C G T A G C T A T G C A G T C A C G T
p-value:1e-10
log p-value:-2.507e+01
Information Content per bp:1.772
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif37.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets46.2 +/- 26.7bp
Average Position of motif in Background47.1 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGGAAGCCTGCAG---
-GGCCYCCTGCTGDGH
 T C G A A C T G A T C G C T G A T G C A A C T G A G T C T A G C G A C T A T C G T G A C C G T A A C T G A C G T A C G T A C G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AGGAAGCCTGCAG---
------CCTGCTGAGH
 T C G A A C T G A T C G C T G A T G C A A C T G A G T C T A G C G A C T A T C G T G A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGGAAGCCTGCAG
---AAGCTTG---
 T C G A A C T G A T C G C T G A T G C A A C T G A G T C T A G C G A C T A T C G T G A C C G T A A C T G
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGGAAGCCTGCAG-----
---TNTCCTGCTGTGNNG
 T C G A A C T G A T C G C T G A T G C A A C T G A G T C T A G C G A C T A T C G T G A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGGAAGCCTGCAG
---AGGCCTNG--
 T C G A A C T G A T C G C T G A T G C A A C T G A G T C T A G C G A C T A T C G T G A C C G T A A C T G
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGGAAGCCTGCAG-----
---NNTCCTGCTGTGNNN
 T C G A A C T G A T C G C T G A T G C A A C T G A G T C T A G C G A C T A T C G T G A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGAAGCCTGCAG--
AGAGRRACAGCWGAC
 T C G A A C T G A T C G C T G A T G C A A C T G A G T C T A G C G A C T A T C G T G A C C G T A A C T G A C G T A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGGAAGCCTGCAG
AVCAGGAAGT------
 A C G T A C G T A C G T T C G A A C T G A T C G C T G A T G C A A C T G A G T C T A G C G A C T A T C G T G A C C G T A A C T G
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGGAAGCCTGCAG-----
---TCNCCTGCTGNGNNN
 T C G A A C T G A T C G C T G A T G C A A C T G A G T C T A G C G A C T A T C G T G A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGAAGCCTGCAG
AGCGCGCC-----
 T C G A A C T G A T C G C T G A T G C A A C T G A G T C T A G C G A C T A T C G T G A C C G T A A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T